Factsheet for HORVU7Hr1G027760.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G034200.1	Wheat	golgi	67.39	100.0
VIT_09s0002g02640.t01	Wine grape	mitochondrion, nucleus	65.22	96.77
Os02t0804100-01	Rice	mitochondrion, nucleus	65.22	96.77
Os06t0172600-00	Rice	nucleus	65.22	96.77
KRH57406	Soybean	mitochondrion, nucleus	65.22	96.77
PGSC0003DMT400000776	Potato	mitochondrion, nucleus	65.22	96.77
PGSC0003DMT400006164	Potato	extracellular	65.22	96.77
EES07706	Sorghum	mitochondrion, nucleus	65.22	96.77
EER87936	Sorghum	mitochondrion, nucleus	65.22	96.77
Solyc08g076340.2.1	Tomato	mitochondrion, nucleus	65.22	96.77
Solyc12g008700.1.1	Tomato	endoplasmic reticulum, unclear	65.22	96.77
Zm00001d018410_P001	Maize	plastid	65.22	96.77
Zm00001d037479_P001	Maize	mitochondrion, nucleus	65.22	96.77
GSMUA_Achr6P35760_001	Banana	cytosol	26.09	96.0
Zm00001d045174_P001	Maize	plastid	64.13	95.16
AT2G19750.1	Thale cress	mitochondrion, nucleus	64.13	95.16
AT5G56670.1	Thale cress	mitochondrion, nucleus	64.13	95.16
AT4G29390.1	Thale cress	mitochondrion, nucleus	64.13	95.16
CDY21649	Canola	mitochondrion, nucleus	63.04	92.06
CDX82719	Canola	cytosol, mitochondrion	61.96	86.36
VIT_11s0016g02690.t01	Wine grape	cytosol, mitochondrion	65.22	80.0
GSMUA_Achr4P08640_001	Banana	nucleus	35.87	78.57
CDX81943	Canola	plastid	61.96	75.0
CDY06811	Canola	cytosol	64.13	74.68
Bra031096.1-P	Field mustard	cytosol, plastid	63.04	72.5
Zm00001d052003_P002	Maize	plastid	63.04	69.05
CDX88582	Canola	nucleus, plastid	64.13	68.6
CDY35885	Canola	cytosol	61.96	67.86
CDY32875	Canola	nucleus, plastid	67.39	67.39
KRH28081	Soybean	cytosol, mitochondrion	52.17	64.0
CDY43497	Canola	nucleus	67.39	62.0
CDY53992	Canola	mitochondrion, plastid	65.22	61.22
CDY42211	Canola	mitochondrion, plastid	65.22	61.22
CDY32767	Canola	mitochondrion, plastid	65.22	61.22
KRH77363	Soybean	mitochondrion, nucleus	67.39	59.62
GSMUA_Achr4P00880_001	Banana	nucleus	63.04	57.43
CDY41797	Canola	plastid	67.39	56.88
CDY20713	Canola	nucleus	67.39	52.99

Protein Annotations

MapMan:17.1.3.1.32	UniProt:A0A287VUP7	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529	EnsemblPlantsGene:HORVU7Hr1G027760
EnsemblPlants:HORVU7Hr1G027760.1	PFAM:PF04758	PANTHER:PTHR12650	PANTHER:PTHR12650:SF15	InterPro:Ribosomal_S30	UniParc:UPI000B483CC4
SEG:seg	:	:	:	:	:

Description

40S ribosomal protein S30 [Source:UniProtKB/TrEMBL;Acc:A0A287VUP7]

Coordinates

chrchr7H:-:49716110..49716874

Molecular Weight (calculated)

10016.2 Da

IEP (calculated)

12.535

GRAVY (calculated)

-1.147

Length

92 amino acids

Sequence
(BLAST)

1: PQPPPPPTLA HPPSRPPTPP PFRSPTAAVD MGKVHGSLAR AGKVRGQTPK VAKQDKKKQP RGRAHKRIQY NRRFVTAVVG FGKKRGPNSS EK

Best Arabidopsis Sequence Match ( AT4G29390.1 )
(BLAST)

1: MGKVHGSLAR AGKVRGQTPK VAKQDKKKKP RGRAHKRLQH NRRFVTAVVG FGKKRGPNSS EK

Arabidopsis Description

RPS30A40S ribosomal protein S30 [Source:UniProtKB/Swiss-Prot;Acc:P49689]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.