Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015574.1-P | Field mustard | plastid | 87.23 | 86.93 |
| CDY06698 | Canola | plastid | 87.23 | 86.93 |
| CDY10268 | Canola | plastid | 85.46 | 83.68 |
| VIT_06s0004g06140.t01 | Wine grape | plastid | 65.96 | 64.14 |
| GSMUA_Achr8P02340_001 | Banana | plastid | 59.93 | 60.14 |
| EER95130 | Sorghum | plastid | 62.77 | 59.6 |
| KRH48823 | Soybean | plastid | 63.48 | 59.08 |
| Solyc07g061900.2.1 | Tomato | plastid | 60.28 | 59.03 |
| KRH66493 | Soybean | endoplasmic reticulum, nucleus, plastid | 64.54 | 58.71 |
| KRH38064 | Soybean | plastid | 32.27 | 55.15 |
| Os03t0265400-01 | Rice | plastid | 61.35 | 53.56 |
| TraesCS4B01G213600.1 | Wheat | golgi, plastid | 59.22 | 52.35 |
| TraesCS4D01G214300.1 | Wheat | plastid | 59.22 | 52.35 |
| KRH62346 | Soybean | plastid | 36.88 | 51.74 |
| TraesCS4A01G091100.1 | Wheat | plastid | 58.51 | 51.56 |
| HORVU4Hr1G060970.4 | Barley | plastid | 57.8 | 51.1 |
| PGSC0003DMT400018162 | Potato | cytosol | 56.03 | 45.14 |
| AT2G20060.1 | Thale cress | mitochondrion, plastid | 22.34 | 21.0 |
Protein Annotations
| MapMan:17.7.2.1.4 | Gene3D:3.40.1370.10 | EntrezGene:837243 | UniProt:A0A178WQG5 | ProteinID:AAF79563.1 | ProteinID:AEE28106.1 |
| EMBL:AK226511 | ArrayExpress:AT1G07320 | EnsemblPlantsGene:AT1G07320 | RefSeq:AT1G07320 | TAIR:AT1G07320 | RefSeq:AT1G07320-TAIR-G |
| EnsemblPlants:AT1G07320.1 | TAIR:AT1G07320.1 | EMBL:AY063889 | EMBL:AY085081 | EMBL:AY117317 | ProteinID:CAA74895.1 |
| GO:GO:0000311 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008266 |
| GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019538 | GO:GO:0019843 | GO:GO:0022626 | GO:GO:0030529 |
| InterPro:IPR023574 | HAMAP:MF_01328_B | RefSeq:NP_001030985.1 | RefSeq:NP_001030986.1 | RefSeq:NP_563786.1 | UniProt:O50061 |
| ProteinID:OAP19813.1 | PFAM:PF00573 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10746 | UniProt:Q0WW46 | Symbol:RPL4 |
| InterPro:Ribosomal_L4/L1e | InterPro:Ribosomal_L4_dom_sf | InterPro:Ribosomal_uL4/L1e | SUPFAM:SSF52166 | TIGRFAMs:TIGR03953 | UniParc:UPI00000017DB |
| EMBL:Y14565 | SEG:seg | : | : | : | : |
Description
RPL4RPL4 [Source:UniProtKB/TrEMBL;Acc:A0A178WQG5]
Coordinates
chr1:+:2248967..2250529
Molecular Weight (calculated)
30560.3 Da
IEP (calculated)
9.557
GRAVY (calculated)
-0.396
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSATAPNS LSFFSSSLFL SSSHQIPKTY ISVSKLGSGR VSKPLSVSSQ LATLPILSFE GEKVGETYLD LKAAPEDTAR AVVHRAIVTD LNNKRRGTAS
101: TLTRGEVRGG GIKPYSQKKT GHARRGSQRT PLRPGGGVVF GPRPKDWSIK INRKEKKLAI STALSSAASA EGGAIVVEEF GEKFEKPKTK DFLAAMQRWG
201: LDPKEKAMFL MIDVDENVAK SSRNIGTLRM LTPRTLNLFD ILNADKLVLT PAAVEFLNAR YGVDAVEEED DDEDETEGSE EA
101: TLTRGEVRGG GIKPYSQKKT GHARRGSQRT PLRPGGGVVF GPRPKDWSIK INRKEKKLAI STALSSAASA EGGAIVVEEF GEKFEKPKTK DFLAAMQRWG
201: LDPKEKAMFL MIDVDENVAK SSRNIGTLRM LTPRTLNLFD ILNADKLVLT PAAVEFLNAR YGVDAVEEED DDEDETEGSE EA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.