Factsheet for TraesCS4A01G091100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G214300.1	Wheat	plastid	95.94	96.24
TraesCS4B01G213600.1	Wheat	golgi, plastid	86.25	86.52
HORVU4Hr1G060970.4	Barley	plastid	79.38	79.62
Os03t0265400-01	Rice	plastid	73.75	73.06
EER95130	Sorghum	plastid	66.88	72.05
AT1G07320.1	Thale cress	plastid	51.56	58.51
GSMUA_Achr8P02340_001	Banana	plastid	50.62	57.65
KRH66493	Soybean	endoplasmic reticulum, nucleus, plastid	54.69	56.45
Bra015574.1-P	Field mustard	plastid	49.38	55.83
CDY06698	Canola	plastid	49.38	55.83
CDY10268	Canola	plastid	50.0	55.56
VIT_06s0004g06140.t01	Wine grape	plastid	49.69	54.83
KRH48823	Soybean	plastid	51.88	54.79
KRH38064	Soybean	plastid	27.19	52.73
Solyc07g061900.2.1	Tomato	plastid	46.88	52.08
KRH62346	Soybean	plastid	30.94	49.25
PGSC0003DMT400018162	Potato	cytosol	44.06	40.29
Bra029156.1-P	Field mustard	cytosol, endoplasmic reticulum	13.44	38.39
TraesCS6A01G074600.1	Wheat	mitochondrion	21.56	23.88
TraesCS5A01G239300.1	Wheat	mitochondrion	20.94	20.74

Protein Annotations

MapMan:17.7.2.1.4	Gene3D:3.40.1370.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0008266	GO:GO:0009058	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009570
GO:GO:0009579	GO:GO:0009987	GO:GO:0016020	GO:GO:0019538	GO:GO:0022626	InterPro:IPR023574
HAMAP:MF_01328_B	PFAM:PF00573	PANTHER:PTHR10746	InterPro:Ribosomal_L4/L1e	InterPro:Ribosomal_L4_dom_sf	InterPro:Ribosomal_uL4/L1e
SUPFAM:SSF52166	TIGRFAMs:TIGR03953	EnsemblPlantsGene:TraesCS4A01G091100	EnsemblPlants:TraesCS4A01G091100.1	SEG:seg	:

Description

No Description!

Coordinates

chr4A:+:97528371..97531081

Molecular Weight (calculated)

34591.4 Da

IEP (calculated)

5.328

GRAVY (calculated)

-0.500

Length

320 amino acids

Sequence
(BLAST)

001: MPVSSVASPL LLSLSASSSS FLSSSSVSFL PSPSPSPSPF PHASVRGRPS ASILRALRAE ATTLPVINFT GEKVGEVALD IKAAPPSTAR SVVHRALITD
101: RQNARRGTAS TLTRGEVRGG GRKPYGQKKT GKARRGSVRT PLRPGGGVIF GPKPRDWTIK INRKEKRLAI STALASAAVA NDSFVVQEFD EEFATGPRTR
201: DFVAALQRWG LDPREKAMFF STELDDNVRL SGRNIGTLKM LTPRTLNLYD ILDARKHFFT PAAIDYLNSR YGTTGFDEYE GDDGDDDGEE EGVEEQEEGE
301: EITEEAAQDE TGEAEADSIS

Best Arabidopsis Sequence Match ( AT1G07320.2 )
(BLAST)

001: MASSATAPNS LSFFSSSLFL SSSHQIPKTY ISVSKLGSGR VSKPLSVSSQ LATLPILSFE GEKVGETYLD LKAAPEDTAR AVVHRAIVTD LNNKRRGTAS
101: TLTRGEVRGG GIKPYSQKKT GHARRGSQRT PLRPGGGVVF GPRPKDWSIK INRKEKKLAI STALSSAASA EGGAIVVEEF GEKFEKPKTK DFLAAMQRWG
201: LDPKEKAMFL MIDVDENVAK SSRNIGTLRM LTPRTLNLFD ILNADKLVLT PAAVEFLNAR YGVDAVEEED DDEDETEEEA

Arabidopsis Description

RPL4RPL4 [Source:UniProtKB/TrEMBL;Acc:A0A178WQG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.