Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G72175.1 | Thale cress | cytosol, nucleus, plasma membrane | 67.98 | 74.59 |
| Bra012331.1-P | Field mustard | endoplasmic reticulum, nucleus, plasma membrane | 65.52 | 71.12 |
| CDY25740 | Canola | cytosol, nucleus, plasma membrane | 65.52 | 71.12 |
| CDY12526 | Canola | cytosol, nucleus, plasma membrane | 65.02 | 70.59 |
| Solyc11g027810.1.1 | Tomato | plasma membrane | 53.69 | 68.12 |
| VIT_18s0041g00290.t01 | Wine grape | plasma membrane | 54.19 | 59.14 |
| PGSC0003DMT400068737 | Potato | endoplasmic reticulum, nucleus, plasma membrane | 53.69 | 58.92 |
| KRH64784 | Soybean | nucleus | 53.69 | 58.6 |
| GSMUA_Achr7P23200_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 44.83 | 49.19 |
| GSMUA_Achr6P18810_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 41.38 | 45.16 |
| GSMUA_Achr8P08140_001 | Banana | plasma membrane | 39.41 | 43.48 |
| TraesCS4A01G352200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 39.9 | 41.33 |
| TraesCS5D01G518700.2 | Wheat | cytosol, nucleus, plasma membrane, plastid | 39.9 | 41.12 |
| TraesCS5B01G519400.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 39.9 | 41.12 |
| EER90557 | Sorghum | endoplasmic reticulum, nucleus, peroxisome | 38.42 | 40.84 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 33.99 | 37.5 |
| TraesCS3B01G567600.1 | Wheat | mitochondrion | 34.48 | 34.15 |
| TraesCS3D01G511300.1 | Wheat | mitochondrion | 34.48 | 33.98 |
| HORVU3Hr1G111110.1 | Barley | plastid | 26.11 | 30.81 |
| AT4G33940.1 | Thale cress | cytosol | 27.09 | 20.99 |
| Solyc11g027820.1.1 | Tomato | cytosol | 3.45 | 17.5 |
Protein Annotations
| MapMan:35.2 | EntrezGene:838857 | ProteinID:AEE30250.1 | ArrayExpress:AT1G22510 | EnsemblPlantsGene:AT1G22510 | RefSeq:AT1G22510 |
| TAIR:AT1G22510 | RefSeq:AT1G22510-TAIR-G | EnsemblPlants:AT1G22510.2 | TAIR:AT1G22510.2 | Unigene:At.63975 | InterPro:DUF1232 |
| UniProt:F4I1E4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0016874 | GO:GO:0019538 | GO:GO:0061630 | RefSeq:NP_001185064.1 | PFAM:PF06803 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR22894 | PANTHER:PTHR22894:SF5 |
| InterPro:RNF170 | TMHMM:TMhelix | UniParc:UPI0001E92C29 | SEG:seg | : | : |
Description
E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) [Source:UniProtKB/TrEMBL;Acc:F4I1E4]
Coordinates
chr1:-:7950818..7952832
Molecular Weight (calculated)
22789.5 Da
IEP (calculated)
10.182
GRAVY (calculated)
0.368
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHRRTNFVR YAMATSTLLA NPIALTGSAV RSPSYLLSFL LLSNRFGIGN CIMLVWRHGS TLRPCKCPLC RRPISLLVPS EETVRSRNDA TVSEVLHDVE
101: TYNRVFGGQS SGLIQRMQDL PFLLRRLLRE MMDPQRTLPL VIRARVYIAL ILSAIYIISP IDIIPEGVLG VIGLLDDLLI ALICFLHVAA LYRSVLYSRH
201: GGS
101: TYNRVFGGQS SGLIQRMQDL PFLLRRLLRE MMDPQRTLPL VIRARVYIAL ILSAIYIISP IDIIPEGVLG VIGLLDDLLI ALICFLHVAA LYRSVLYSRH
201: GGS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.