Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63075 | Canola | mitochondrion | 67.83 | 72.95 |
| CDY12287 | Canola | mitochondrion | 66.56 | 70.61 |
| Bra023208.1-P | Field mustard | mitochondrion | 64.97 | 66.02 |
| Solyc08g075720.1.1 | Tomato | cytosol | 28.03 | 56.41 |
| VIT_05s0062g00880.t01 | Wine grape | mitochondrion | 32.48 | 51.52 |
| PGSC0003DMT400079312 | Potato | mitochondrion | 31.53 | 42.49 |
| GSMUA_AchrUn_... | Banana | cytosol | 21.97 | 40.35 |
| KRH38700 | Soybean | mitochondrion | 36.62 | 34.95 |
| KRH09204 | Soybean | cytosol | 34.71 | 32.06 |
| CDY47693 | Canola | plastid | 34.71 | 30.79 |
| HORVU2Hr1G124790.2 | Barley | mitochondrion | 22.93 | 28.92 |
| TraesCS3B01G552000.1 | Wheat | mitochondrion | 23.25 | 27.86 |
| HORVU3Hr1G109340.1 | Barley | mitochondrion | 23.57 | 27.11 |
| TraesCS2A01G575400.1 | Wheat | mitochondrion, plastid | 23.57 | 27.11 |
| Zm00001d009476_P001 | Maize | mitochondrion | 21.66 | 26.98 |
| TraesCS3D01G496900.1 | Wheat | mitochondrion | 21.97 | 26.34 |
| KXG22494 | Sorghum | mitochondrion | 21.34 | 26.27 |
| TraesCS3A01G490900.1 | Wheat | mitochondrion | 22.61 | 25.91 |
| TraesCS2A01G459000.1 | Wheat | mitochondrion | 15.29 | 25.53 |
| Os03t0385900-01 | Rice | plastid | 26.11 | 24.7 |
| TraesCS2D01G586100.1 | Wheat | mitochondrion | 21.97 | 24.13 |
| TraesCS2B01G611800.2 | Wheat | mitochondrion, plastid | 23.57 | 24.1 |
| HORVU0Hr1G005500.4 | Barley | nucleus, plastid | 18.15 | 18.69 |
Protein Annotations
| MapMan:17.7.1.2.9 | Gene3D:3.30.420.80 | EntrezGene:840071 | ProteinID:AAG50732.1 | ProteinID:AEE31398.1 | ArrayExpress:AT1G31817 |
| EnsemblPlantsGene:AT1G31817 | RefSeq:AT1G31817 | TAIR:AT1G31817 | RefSeq:AT1G31817-TAIR-G | EnsemblPlants:AT1G31817.1 | TAIR:AT1G31817.1 |
| EMBL:AY063845 | EMBL:AY117289 | Unigene:At.24108 | GO:GO:0000028 | GO:GO:0000462 | GO:GO:0000741 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005763 |
| GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010197 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0019843 |
| GO:GO:0030154 | GO:GO:0030529 | GO:GO:0048027 | GO:GO:0070181 | InterPro:IPR036967 | HAMAP:MF_01310 |
| Symbol:NFD3 | RefSeq:NP_564385.1 | PFAM:PF00411 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR11759 | PANTHER:PTHR11759:SF8 | UniProt:Q8VZT8 | InterPro:Ribosomal_S11 | InterPro:Ribosomal_S11_sf | SUPFAM:SSF53137 |
| UniParc:UPI00000A90E5 | SEG:seg | : | : | : | : |
Description
NFD3Probable ribosomal protein S11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZT8]
Coordinates
chr1:-:11414695..11416444
Molecular Weight (calculated)
33928.0 Da
IEP (calculated)
11.154
GRAVY (calculated)
-0.618
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGVSRHLRA SSLLSLIRSY GGINSVCRFS SQSDGFSGGR FREQVPVSGE SANNSGLSNT GRIGSSPEPN PSTLRTFGDM KAGLLNRGVN GFSAPNAPPT
101: FKSSLRSRLP NSLPDQFGQT NPGLPNTGGS GFSAPSLSSY ENFTQSSSLL KENSRSGGKS SDLDFVREVI EDEGRRTAGI FSHFQRPNLE TNADIIHIKM
201: LRNNTFVTVT DSKGNVKCKA TSGSLPDLKG GRKMTNYTAD ATAENIGRRA KAMGLKSVVV KVNGFTHFGK KKKAIIAFRD GFTNSRSDQN PIVYIEDTTR
301: KAHNGCRLPR KRRV
101: FKSSLRSRLP NSLPDQFGQT NPGLPNTGGS GFSAPSLSSY ENFTQSSSLL KENSRSGGKS SDLDFVREVI EDEGRRTAGI FSHFQRPNLE TNADIIHIKM
201: LRNNTFVTVT DSKGNVKCKA TSGSLPDLKG GRKMTNYTAD ATAENIGRRA KAMGLKSVVV KVNGFTHFGK KKKAIIAFRD GFTNSRSDQN PIVYIEDTTR
301: KAHNGCRLPR KRRV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.