Factsheet for Os03t0385900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	32.83	63.74
Zm00001d009476_P001	Maize	mitochondrion	40.66	53.57
KXG22494	Sorghum	mitochondrion	39.76	51.76
Solyc08g075720.1.1	Tomato	cytosol	21.99	46.79
VIT_05s0062g00880.t01	Wine grape	mitochondrion	25.6	42.93
HORVU2Hr1G124790.2	Barley	mitochondrion	31.33	41.77
TraesCS3D01G496900.1	Wheat	mitochondrion	32.53	41.22
TraesCS3B01G552000.1	Wheat	mitochondrion	32.23	40.84
HORVU3Hr1G109340.1	Barley	mitochondrion	33.43	40.66
TraesCS2A01G575400.1	Wheat	mitochondrion, plastid	33.43	40.66
TraesCS3A01G490900.1	Wheat	mitochondrion	33.43	40.51
TraesCS2A01G459000.1	Wheat	mitochondrion	22.29	39.36
TraesCS2D01G586100.1	Wheat	mitochondrion	32.23	37.41
TraesCS2B01G611800.2	Wheat	mitochondrion, plastid	33.43	36.16
PGSC0003DMT400079312	Potato	mitochondrion	23.8	33.91
CDY63075	Canola	mitochondrion	24.4	27.74
CDY12287	Canola	mitochondrion	24.1	27.03
HORVU0Hr1G005500.4	Barley	nucleus, plastid	24.7	26.89
KRH09204	Soybean	cytosol	26.81	26.18
KRH38700	Soybean	mitochondrion	25.9	26.14
AT1G31817.1	Thale cress	mitochondrion	24.7	26.11
Bra023208.1-P	Field mustard	mitochondrion	23.49	25.24
CDY47693	Canola	plastid	18.37	17.23

Protein Annotations

MapMan:17.7.1.2.9	Gene3D:3.30.420.80	EntrezGene:4332994	ProteinID:ABF96308.1	EMBL:AK072987	ProteinID:BAF12167.1
ProteinID:BAS84472.1	GO:GO:0000028	GO:GO:0000462	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005763	GO:GO:0005840	GO:GO:0006139	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538
GO:GO:0048027	GO:GO:0070181	InterPro:IPR036967	HAMAP:MF_01310	EnsemblPlantsGene:Os03g0385900	EnsemblPlants:Os03t0385900-01
PFAM:PF00411	PANTHER:PTHR11759	PANTHER:PTHR11759:SF8	UniProt:Q10KG1	InterPro:Ribosomal_S11	InterPro:Ribosomal_S11_sf
SUPFAM:SSF53137	UniParc:UPI0000DB4DD9	RefSeq:XP_015628011.1	SEG:seg	:	:

Description

RIBOSOMAL PROTEIN S11Mitochondrial ribosomal protein S11 (Nuclear encoded). (Os03t0385900-01);Similar to Mitochondrial ribosomal protein S11. (Os03t0385900-03)

Coordinates

chr3:-:15321862..15323947

Molecular Weight (calculated)

36230.5 Da

IEP (calculated)

11.696

GRAVY (calculated)

-0.600

Length

332 amino acids

Sequence
(BLAST)

001: MHSLPPPAAA SLPILLLLRR RRRREVHLCS GSGDTASEER RGGGEGVRVR PGLGTTSKPA SPPVPLDPGR AFSGDLTAMA SRRLFASLLR STAAPRTPST
101: PGCLFNRAAA AAYSSSAPYN GQGFPLPQSE TASRLGLFSS PGDTRQPSYG DRLMQSQQLS QDYRARTQAN NAPRFGDTMS RIAGGENSSY FGTPSRIFDE
201: HKQSLVKGKR DFVHVLLKRN KTFVTVTDVR GNKKTGASAG CLEDRKGRSR LSKYAAEATA EHVGRAARKM GLKSVVMKVK GTTFFNKKKK VILSFREGFR
301: GERVREQSPV VLIHDVTQLP HNGCRLPKQR RV

Best Arabidopsis Sequence Match ( AT1G31817.1 )
(BLAST)

001: MNGVSRHLRA SSLLSLIRSY GGINSVCRFS SQSDGFSGGR FREQVPVSGE SANNSGLSNT GRIGSSPEPN PSTLRTFGDM KAGLLNRGVN GFSAPNAPPT
101: FKSSLRSRLP NSLPDQFGQT NPGLPNTGGS GFSAPSLSSY ENFTQSSSLL KENSRSGGKS SDLDFVREVI EDEGRRTAGI FSHFQRPNLE TNADIIHIKM
201: LRNNTFVTVT DSKGNVKCKA TSGSLPDLKG GRKMTNYTAD ATAENIGRRA KAMGLKSVVV KVNGFTHFGK KKKAIIAFRD GFTNSRSDQN PIVYIEDTTR
301: KAHNGCRLPR KRRV

Arabidopsis Description

NFD3Probable ribosomal protein S11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZT8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.