Factsheet for Solyc08g075720.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079312	Potato	mitochondrion	98.72	66.09
VIT_05s0062g00880.t01	Wine grape	mitochondrion	65.38	51.52
GSMUA_AchrUn_...	Banana	cytosol	48.72	44.44
KRH38700	Soybean	mitochondrion	64.1	30.4
CDY63075	Canola	mitochondrion	55.77	29.79
CDY12287	Canola	mitochondrion	56.41	29.73
KRH09204	Soybean	cytosol	63.46	29.12
Zm00001d009476_P001	Maize	mitochondrion	46.15	28.57
Bra023208.1-P	Field mustard	mitochondrion	56.41	28.48
AT1G31817.1	Thale cress	mitochondrion	56.41	28.03
KXG22494	Sorghum	mitochondrion	44.23	27.06
HORVU2Hr1G124790.2	Barley	mitochondrion	38.46	24.1
TraesCS2A01G459000.1	Wheat	mitochondrion	28.21	23.4
TraesCS3B01G552000.1	Wheat	mitochondrion	38.46	22.9
TraesCS3D01G496900.1	Wheat	mitochondrion	38.46	22.9
Os03t0385900-01	Rice	plastid	46.79	21.99
HORVU3Hr1G109340.1	Barley	mitochondrion	38.46	21.98
TraesCS2A01G575400.1	Wheat	mitochondrion, plastid	38.46	21.98
TraesCS3A01G490900.1	Wheat	mitochondrion	38.46	21.9
TraesCS2D01G586100.1	Wheat	mitochondrion	37.82	20.63
TraesCS2B01G611800.2	Wheat	mitochondrion, plastid	38.46	19.54
CDY47693	Canola	plastid	41.03	18.08
HORVU0Hr1G005500.4	Barley	nucleus, plastid	26.28	13.44

Protein Annotations

MapMan:17.7.1.2.9	Gene3D:3.30.420.80	GO:GO:0000028	GO:GO:0000462	GO:GO:0000741	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005763	GO:GO:0005840
GO:GO:0006139	GO:GO:0006412	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0010197	GO:GO:0016043	GO:GO:0019538	GO:GO:0030154	GO:GO:0048027
GO:GO:0070181	InterPro:IPR036967	UniProt:K4CMT9	HAMAP:MF_01310	PFAM:PF00411	PIRSF:PIRSF002131
PANTHER:PTHR11759	PANTHER:PTHR11759:SF8	InterPro:Ribosomal_S11	InterPro:Ribosomal_S11_sf	SUPFAM:SSF53137	EnsemblPlantsGene:Solyc08g075720.1
EnsemblPlants:Solyc08g075720.1.1	UniParc:UPI000276B8BD	:	:	:	:

Description

No Description!

Coordinates

chr8:-:59846295..59846765

Molecular Weight (calculated)

17487.9 Da

IEP (calculated)

11.024

GRAVY (calculated)

-0.783

Length

156 amino acids

Sequence
(BLAST)

001: MGNNYRPMDF VRGLTEDNAR RFPSGAPLSR YHIEQDADIV HIKVLRNNAF VTVTDSKGNK KFGASAGKLT GKGGKVARYS AESTAEHVGR EARDRGLGSV
101: VMKVNGFTYF KKKKQAILSF REGYTHSRGD KNPVVFIEDT TRKPHNGCRL TKKRRI

Best Arabidopsis Sequence Match ( AT1G31817.1 )
(BLAST)

001: MNGVSRHLRA SSLLSLIRSY GGINSVCRFS SQSDGFSGGR FREQVPVSGE SANNSGLSNT GRIGSSPEPN PSTLRTFGDM KAGLLNRGVN GFSAPNAPPT
101: FKSSLRSRLP NSLPDQFGQT NPGLPNTGGS GFSAPSLSSY ENFTQSSSLL KENSRSGGKS SDLDFVREVI EDEGRRTAGI FSHFQRPNLE TNADIIHIKM
201: LRNNTFVTVT DSKGNVKCKA TSGSLPDLKG GRKMTNYTAD ATAENIGRRA KAMGLKSVVV KVNGFTHFGK KKKAIIAFRD GFTNSRSDQN PIVYIEDTTR
301: KAHNGCRLPR KRRV

Arabidopsis Description

NFD3Probable ribosomal protein S11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZT8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.