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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g075720.1.1 Tomato cytosol 66.09 98.72
VIT_05s0062g00880.t01 Wine grape mitochondrion 45.92 54.04
GSMUA_AchrUn_... Banana cytosol 32.62 44.44
KRH38700 Soybean mitochondrion 48.5 34.35
CDY12287 Canola mitochondrion 42.06 33.11
KRH09204 Soybean cytosol 48.07 32.94
CDY63075 Canola mitochondrion 41.2 32.88
Bra023208.1-P Field mustard mitochondrion 42.06 31.72
AT1G31817.1 Thale cress mitochondrion 42.49 31.53
Zm00001d009476_P001 Maize mitochondrion 32.62 30.16
KXG22494 Sorghum mitochondrion 32.19 29.41
TraesCS2A01G459000.1 Wheat mitochondrion 21.46 26.6
HORVU2Hr1G124790.2 Barley mitochondrion 26.61 24.9
TraesCS3B01G552000.1 Wheat mitochondrion 27.47 24.43
TraesCS3D01G496900.1 Wheat mitochondrion 27.04 24.05
Os03t0385900-01 Rice plastid 33.91 23.8
TraesCS2A01G575400.1 Wheat mitochondrion, plastid 27.04 23.08
TraesCS3A01G490900.1 Wheat mitochondrion 27.04 22.99
HORVU3Hr1G109340.1 Barley mitochondrion 26.61 22.71
TraesCS2D01G586100.1 Wheat mitochondrion 26.61 21.68
TraesCS2B01G611800.2 Wheat mitochondrion, plastid 27.04 20.52
CDY47693 Canola plastid 29.18 19.21
HORVU0Hr1G005500.4 Barley nucleus, plastid 19.31 14.75
Protein Annotations
EntrezGene:102605043MapMan:17.7.1.2.9Gene3D:3.30.420.80GO:GO:0000741GO:GO:0003674GO:GO:0003735
GO:GO:0005198GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005840
GO:GO:0006412GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0010197GO:GO:0016043GO:GO:0019538GO:GO:0030154InterPro:IPR036967UniProt:M1D1L4
HAMAP:MF_01310PFAM:PF00411EnsemblPlantsGene:PGSC0003DMG400030869PGSC:PGSC0003DMG400030869EnsemblPlants:PGSC0003DMT400079312PANTHER:PTHR11759
PANTHER:PTHR11759:SF8InterPro:Ribosomal_S11InterPro:Ribosomal_S11_sfSUPFAM:SSF53137UniParc:UPI00029498B0RefSeq:XP_006364456.1
Description
30S ribosomal protein S11 [Source:PGSC_GENE;Acc:PGSC0003DMG400030869]
Coordinates
chr8:-:48050545..48054267
Molecular Weight (calculated)
25981.0 Da
IEP (calculated)
10.943
GRAVY (calculated)
-0.675
Length
233 amino acids
Sequence
(BLAST)
001: MKLIRSVLWA ANAFKLRSSD HPQAFRTFST LPNFGIQGKT ESKIYSNQNS ISGMNGCSTC NVGRRCFLHS GSPKEAEMGN NYRPMDFVRG LTEDNARRFP
101: SGAPLSRYHI EQDADIVHIK VLRNNAFVTV TDSKGNKKFG ASAGKLTGKG GKVARYSAES TAEHVGREAR DRGLGSVVMK VNGFTYFKKK KQAILSFREG
201: YTHSRGDKNP VVFIEDTTRK PHNGCRLTKK RRI
Best Arabidopsis Sequence Match ( AT1G31817.1 )
(BLAST)
001: MNGVSRHLRA SSLLSLIRSY GGINSVCRFS SQSDGFSGGR FREQVPVSGE SANNSGLSNT GRIGSSPEPN PSTLRTFGDM KAGLLNRGVN GFSAPNAPPT
101: FKSSLRSRLP NSLPDQFGQT NPGLPNTGGS GFSAPSLSSY ENFTQSSSLL KENSRSGGKS SDLDFVREVI EDEGRRTAGI FSHFQRPNLE TNADIIHIKM
201: LRNNTFVTVT DSKGNVKCKA TSGSLPDLKG GRKMTNYTAD ATAENIGRRA KAMGLKSVVV KVNGFTHFGK KKKAIIAFRD GFTNSRSDQN PIVYIEDTTR
301: KAHNGCRLPR KRRV
Arabidopsis Description
NFD3Probable ribosomal protein S11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZT8]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.