Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc08g075720.1.1 | Tomato | cytosol | 44.44 | 48.72 |
VIT_05s0062g00880.t01 | Wine grape | mitochondrion | 53.8 | 46.46 |
KXG22494 | Sorghum | mitochondrion | 60.82 | 40.78 |
Zm00001d009476_P001 | Maize | mitochondrion | 58.48 | 39.68 |
HORVU2Hr1G124790.2 | Barley | mitochondrion | 53.22 | 36.55 |
TraesCS3B01G552000.1 | Wheat | mitochondrion | 53.8 | 35.11 |
TraesCS3D01G496900.1 | Wheat | mitochondrion | 52.63 | 34.35 |
HORVU3Hr1G109340.1 | Barley | mitochondrion | 54.39 | 34.07 |
TraesCS2A01G575400.1 | Wheat | mitochondrion, plastid | 53.8 | 33.7 |
TraesCS3A01G490900.1 | Wheat | mitochondrion | 53.22 | 33.21 |
TraesCS2A01G459000.1 | Wheat | mitochondrion | 36.26 | 32.98 |
Os03t0385900-01 | Rice | plastid | 63.74 | 32.83 |
PGSC0003DMT400079312 | Potato | mitochondrion | 44.44 | 32.62 |
TraesCS2D01G586100.1 | Wheat | mitochondrion | 51.46 | 30.77 |
TraesCS2B01G611800.2 | Wheat | mitochondrion, plastid | 53.22 | 29.64 |
KRH38700 | Soybean | mitochondrion | 48.54 | 25.23 |
KRH09204 | Soybean | cytosol | 48.54 | 24.41 |
CDY12287 | Canola | mitochondrion | 40.94 | 23.65 |
CDY63075 | Canola | mitochondrion | 39.77 | 23.29 |
Bra023208.1-P | Field mustard | mitochondrion | 40.94 | 22.65 |
AT1G31817.1 | Thale cress | mitochondrion | 40.35 | 21.97 |
HORVU0Hr1G005500.4 | Barley | nucleus, plastid | 35.67 | 20.0 |
CDY47693 | Canola | plastid | 32.75 | 15.82 |
Protein Annotations
MapMan:17.7.1.2.9 | Gene3D:3.30.420.80 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_AchrUn_randomG05430_001 | EnsemblPlants:GSMUA_AchrUn_randomP05430_001 |
EnsemblPlants:GSMUA_AchrUn_randomT05430_001 | InterPro:IPR036967 | UniProt:M0U6K5 | HAMAP:MF_01310 | PFAM:PF00411 | PIRSF:PIRSF002131 |
PANTHER:PTHR11759 | PANTHER:PTHR11759:SF8 | InterPro:Ribosomal_S11 | InterPro:Ribosomal_S11_sf | SUPFAM:SSF53137 | UniParc:UPI00029654DE |
Description
Putative 30S ribosomal protein S11 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG05430_001]
Coordinates
chrchrUn_random:+:21128425..21128960
Molecular Weight (calculated)
19267.2 Da
IEP (calculated)
10.831
GRAVY (calculated)
-0.713
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQEKTRTDT YRLGLADAGS FKSMNFVQSI SEEDEQLEQR TNKRDLVHVL LNKNNTFVTV TDARGNKKTG ASAGCLEERK GRSRLSRYAA EATAEHVGRS
101: ARKIGLKSVV MKVKGSTYFR KKNKVILSWR EGFRGEGVGD PSPILYINDV TQLPHNGCRL PKKRRVQIVP F
101: ARKIGLKSVV MKVKGSTYFR KKNKVILSWR EGFRGEGVGD PSPILYINDV TQLPHNGCRL PKKRRVQIVP F
001: MNGVSRHLRA SSLLSLIRSY GGINSVCRFS SQSDGFSGGR FREQVPVSGE SANNSGLSNT GRIGSSPEPN PSTLRTFGDM KAGLLNRGVN GFSAPNAPPT
101: FKSSLRSRLP NSLPDQFGQT NPGLPNTGGS GFSAPSLSSY ENFTQSSSLL KENSRSGGKS SDLDFVREVI EDEGRRTAGI FSHFQRPNLE TNADIIHIKM
201: LRNNTFVTVT DSKGNVKCKA TSGSLPDLKG GRKMTNYTAD ATAENIGRRA KAMGLKSVVV KVNGFTHFGK KKKAIIAFRD GFTNSRSDQN PIVYIEDTTR
301: KAHNGCRLPR KRRV
101: FKSSLRSRLP NSLPDQFGQT NPGLPNTGGS GFSAPSLSSY ENFTQSSSLL KENSRSGGKS SDLDFVREVI EDEGRRTAGI FSHFQRPNLE TNADIIHIKM
201: LRNNTFVTVT DSKGNVKCKA TSGSLPDLKG GRKMTNYTAD ATAENIGRRA KAMGLKSVVV KVNGFTHFGK KKKAIIAFRD GFTNSRSDQN PIVYIEDTTR
301: KAHNGCRLPR KRRV
Arabidopsis Description
NFD3Probable ribosomal protein S11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZT8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.