Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G17030.1 | Thale cress | cytosol | 57.43 | 57.0 |
| CDY67092 | Canola | cytosol | 53.71 | 53.32 |
| KRH32947 | Soybean | endoplasmic reticulum, vacuole | 24.75 | 37.74 |
| VIT_03s0038g03630.t01 | Wine grape | cytosol, plastid | 26.49 | 36.15 |
| Solyc01g111920.2.1 | Tomato | cytosol | 33.66 | 33.5 |
| PGSC0003DMT400047938 | Potato | cytosol | 33.66 | 33.25 |
| VIT_03s0038g02910.t01 | Wine grape | golgi | 29.7 | 32.0 |
| VIT_03s0038g02890.t01 | Wine grape | cytosol | 31.44 | 27.55 |
| AT5G60060.1 | Thale cress | cytosol | 21.78 | 23.53 |
| AT1G65735.1 | Thale cress | cytosol | 3.71 | 23.44 |
| AT2G26160.1 | Thale cress | cytosol | 17.57 | 21.45 |
| AT4G35733.1 | Thale cress | cytosol | 18.32 | 20.67 |
| AT1G44080.1 | Thale cress | nucleus | 17.33 | 20.17 |
| AT1G65770.1 | Thale cress | plastid | 17.57 | 19.72 |
| AT1G65740.1 | Thale cress | cytosol | 17.57 | 19.14 |
| AT3G25750.2 | Thale cress | cytosol | 16.83 | 18.78 |
| AT1G65760.1 | Thale cress | cytosol, golgi, plasma membrane | 15.84 | 17.68 |
| AT1G57906.1 | Thale cress | cytosol | 9.65 | 17.11 |
| AT2G17690.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 16.58 | 15.91 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:35.1 | EntrezGene:816208 | ProteinID:AEC06577.2 | ArrayExpress:AT2G17036 | EnsemblPlantsGene:AT2G17036 |
| RefSeq:AT2G17036 | TAIR:AT2G17036 | RefSeq:AT2G17036-TAIR-G | EnsemblPlants:AT2G17036.1 | TAIR:AT2G17036.1 | EMBL:AY219075 |
| EMBL:AY649295 | InterPro:DUF295 | InterPro:F-box_dom | GO:GO:0000724 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006260 | GO:GO:0006284 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009378 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0032508 | GO:GO:0043140 |
| InterPro:IPR001810 | RefSeq:NP_001318237.1 | PFAM:PF03478 | PO:PO:0000293 | PANTHER:PTHR13710 | PANTHER:PTHR13710:SF83 |
| UniProt:Q6DR20 | SMART:SM00256 | UniParc:UPI00003CEB7A | : | : | : |
Description
F-box protein At2g17036 [Source:UniProtKB/Swiss-Prot;Acc:Q6DR20]
Coordinates
chr2:+:7403693..7405262
Molecular Weight (calculated)
46812.0 Da
IEP (calculated)
5.333
GRAVY (calculated)
-0.146
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDWATLPKD LLDLISKCLE SSFDLIQFRS VCSSWRSAAG PKRLLWAHNL PFFPSDDKPF LSNVILRVAH QSILLIKPNE PQCEADLFGW IVKVWDNIYV
101: SRKMTLLKPL SSSRNYFPQH LPRIFDMSKF TVRELCREVK LYHPDYYCVP GHTALELELG KTVVKYLNDD KFVLLTILEY GKLAVFRSWD REWTVINDYI
201: PSRCQDLIMF DGRFFAIDYN GRTVVVDYSS FKLTLAANPL IGGGDKKFLI ESCGEMFLVD IEFCLNEKPE FTGGFYSYFN ETTVSYKFKF FKLVEREKRW
301: VEVEDLGDKM FFLGDDSTFS ASTADIIPRC VGTGSFVFFY THEESLVVMD DRNLGVFDFR SGKTELVNKL PEYAKLFWPP PPWITTSHES VENYTGETSS
401: QSQS
101: SRKMTLLKPL SSSRNYFPQH LPRIFDMSKF TVRELCREVK LYHPDYYCVP GHTALELELG KTVVKYLNDD KFVLLTILEY GKLAVFRSWD REWTVINDYI
201: PSRCQDLIMF DGRFFAIDYN GRTVVVDYSS FKLTLAANPL IGGGDKKFLI ESCGEMFLVD IEFCLNEKPE FTGGFYSYFN ETTVSYKFKF FKLVEREKRW
301: VEVEDLGDKM FFLGDDSTFS ASTADIIPRC VGTGSFVFFY THEESLVVMD DRNLGVFDFR SGKTELVNKL PEYAKLFWPP PPWITTSHES VENYTGETSS
401: QSQS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.