Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41638 | Canola | cytosol | 58.66 | 59.83 |
| CDY64038 | Canola | cytosol | 56.98 | 58.96 |
| Bra010521.1-P | Field mustard | cytosol | 56.7 | 57.02 |
| AT1G65735.1 | Thale cress | cytosol | 10.06 | 56.25 |
| AT1G44080.1 | Thale cress | nucleus | 48.04 | 49.57 |
| AT3G25750.2 | Thale cress | cytosol | 41.62 | 41.16 |
| AT2G26160.1 | Thale cress | cytosol | 37.71 | 40.79 |
| AT1G65770.1 | Thale cress | plastid | 40.78 | 40.56 |
| AT1G65760.1 | Thale cress | cytosol, golgi, plasma membrane | 36.87 | 36.46 |
| AT1G65740.1 | Thale cress | cytosol | 37.71 | 36.39 |
| AT2G17690.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 41.34 | 35.15 |
| AT1G57906.1 | Thale cress | cytosol | 18.16 | 28.51 |
| KRH69707 | Soybean | cytosol | 27.37 | 25.86 |
| PGSC0003DMT400015524 | Potato | cytosol | 10.89 | 21.79 |
| KRH07955 | Soybean | plastid | 12.01 | 20.09 |
| AT5G60060.1 | Thale cress | cytosol | 20.11 | 19.25 |
| PGSC0003DMT400015466 | Potato | cytosol | 22.63 | 18.75 |
| Solyc02g083170.2.1 | Tomato | nucleus | 25.14 | 18.52 |
| PGSC0003DMT400003919 | Potato | cytosol | 24.86 | 18.43 |
| PGSC0003DMT400015519 | Potato | cytosol | 21.23 | 18.4 |
| AT2G17036.1 | Thale cress | cytosol | 20.67 | 18.32 |
| AT2G17030.1 | Thale cress | cytosol | 20.67 | 18.18 |
| PGSC0003DMT400015516 | Potato | cytosol | 13.41 | 17.39 |
| PGSC0003DMT400015444 | Potato | cytosol | 10.61 | 16.81 |
| Solyc11g005160.1.1 | Tomato | nucleus | 20.11 | 16.74 |
| PGSC0003DMT400015473 | Potato | cytosol | 19.27 | 16.31 |
| PGSC0003DMT400015469 | Potato | cytosol | 17.04 | 13.74 |
Protein Annotations
| MapMan:35.1 | EntrezGene:6240365 | ProteinID:AEE86555.1 | ArrayExpress:AT4G35733 | EnsemblPlantsGene:AT4G35733 | RefSeq:AT4G35733 |
| TAIR:AT4G35733 | RefSeq:AT4G35733-TAIR-G | EnsemblPlants:AT4G35733.1 | TAIR:AT4G35733.1 | Unigene:At.68603 | UniProt:B3H6C3 |
| ProteinID:CAA20044.1 | ProteinID:CAB81483.1 | InterPro:DUF295 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0000724 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009378 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016567 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0032508 | GO:GO:0043140 | InterPro:IPR001810 | RefSeq:NP_001119124.1 | PFAM:PF00646 | PFAM:PF03478 |
| PANTHER:PTHR13710 | PANTHER:PTHR13710:SF83 | SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI0001739458 | : |
Description
F-box protein At4g35733 [Source:UniProtKB/Swiss-Prot;Acc:B3H6C3]
Coordinates
chr4:+:16934236..16935502
Molecular Weight (calculated)
41401.5 Da
IEP (calculated)
5.997
GRAVY (calculated)
-0.108
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEATVWSDL PGELLDHIAN GLFSKVELLR FRSICKTFRS AVDSDKNFLD HLKRNRRRLL SPYSTGKTCS LSPAAFYRVV LSSYPDKGWL IKLQDAYVSS
101: QKQLLSPLSR FSIKSSGKTL DLLEFTVSEI HQSYDVEYLY YNSTRASFNF ARVVLAEDFV FIVDNYKKIW LCNSNESDSH WVRIMDEEVK LFSDIVFHKG
201: YMYALDLTGA VWWISLSEFG IFQFGPSSTP MDYCDIDECK DKRFVEYCGD LCIVHRFSRK FRIKRVDIDM TVGFKVYKMD EELVEYVEVK SLGDKAFVMA
301: TDSCFSVLAR EYYGCLENSI YFTEQNNVKV FKLGDGSITN MVDSSFQSCF QMLIPPLV
101: QKQLLSPLSR FSIKSSGKTL DLLEFTVSEI HQSYDVEYLY YNSTRASFNF ARVVLAEDFV FIVDNYKKIW LCNSNESDSH WVRIMDEEVK LFSDIVFHKG
201: YMYALDLTGA VWWISLSEFG IFQFGPSSTP MDYCDIDECK DKRFVEYCGD LCIVHRFSRK FRIKRVDIDM TVGFKVYKMD EELVEYVEVK SLGDKAFVMA
301: TDSCFSVLAR EYYGCLENSI YFTEQNNVKV FKLGDGSITN MVDSSFQSCF QMLIPPLV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.