Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33135 | Canola | peroxisome | 12.67 | 100.0 |
| CDX92920 | Canola | peroxisome | 95.66 | 95.66 |
| CDY38634 | Canola | peroxisome | 95.66 | 95.66 |
| CDY24258 | Canola | peroxisome | 95.49 | 95.49 |
| Bra031301.1-P | Field mustard | peroxisome | 93.4 | 95.22 |
| CDY33134 | Canola | peroxisome | 79.34 | 94.62 |
| Bra001843.1-P | Field mustard | peroxisome | 87.85 | 94.05 |
| VIT_12s0059g02350.t01 | Wine grape | peroxisome | 82.64 | 82.64 |
| KRH57633 | Soybean | peroxisome | 17.53 | 82.11 |
| Solyc07g052480.2.1 | Tomato | extracellular, nucleus, peroxisome | 81.25 | 81.39 |
| PGSC0003DMT400065512 | Potato | peroxisome | 80.56 | 80.7 |
| GSMUA_Achr9P11850_001 | Banana | peroxisome | 77.26 | 79.89 |
| KRH25405 | Soybean | peroxisome | 78.47 | 78.61 |
| KRH56100 | Soybean | peroxisome | 78.12 | 78.12 |
| Os07t0529000-01 | Rice | peroxisome, plasma membrane, plastid | 77.43 | 77.97 |
| TraesCS2D01G224200.1 | Wheat | peroxisome | 77.08 | 77.89 |
| HORVU2Hr1G045340.1 | Barley | peroxisome | 76.91 | 77.72 |
| TraesCS2A01G219100.1 | Wheat | peroxisome | 76.74 | 77.54 |
| EER99471 | Sorghum | peroxisome | 77.26 | 77.53 |
| Zm00001d021666_P001 | Maize | peroxisome | 75.69 | 75.04 |
| TraesCS2B01G244600.1 | Wheat | peroxisome | 77.08 | 71.38 |
Protein Annotations
| KEGG:00630+4.1.3.1 | Gene3D:1.10.10.850 | Gene3D:3.20.20.60 | MapMan:5.7.3.6.3 | EntrezGene:821726 | UniProt:A0A178VFU1 |
| ProteinID:AAA32823.2 | ProteinID:AEE76544.1 | EMBL:AK226403 | EMBL:AK316978 | ArrayExpress:AT3G21720 | EnsemblPlantsGene:AT3G21720 |
| RefSeq:AT3G21720 | TAIR:AT3G21720 | RefSeq:AT3G21720-TAIR-G | EnsemblPlants:AT3G21720.1 | TAIR:AT3G21720.1 | EMBL:AY140000 |
| Unigene:At.38005 | ProteinID:BAB02834.1 | EMBL:BT010397 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004451 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 |
| GO:GO:0005975 | GO:GO:0006091 | GO:GO:0006097 | GO:GO:0006099 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009514 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0019752 | GO:GO:0046872 | Symbol:ICL |
| InterPro:Isocitrate_lyase | InterPro:Isocitrate_lyase_ph_CS | RefSeq:NP_188809.2 | ProteinID:OAP04614.1 | UniProt:P28297 | PFAM:PF00463 |
| PIRSF:PIRSF001362 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0025022 | ScanProsite:PS00161 | PANTHER:PTHR21631 |
| PANTHER:PTHR21631:SF26 | InterPro:Pyrv/PenolPyrv_Kinase-like_dom | UniProt:Q0WWE9 | SUPFAM:SSF51621 | TIGRFAMs:TIGR01346 | UniParc:UPI00000017EF |
| EMBL:Z18772 | SEG:seg | : | : | : | : |
Description
ICLIsocitrate lyase [Source:UniProtKB/Swiss-Prot;Acc:P28297]
Coordinates
chr3:-:7652487..7656053
Molecular Weight (calculated)
64248.3 Da
IEP (calculated)
7.204
GRAVY (calculated)
-0.344
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASFSVPSM IMEEEGRFEA EVAEVQTWWS SERFKLTRRP YTARDVVALR GHLKQGYASN EMAKKLWRTL KSHQANGTAS RTFGALDPVQ VTMMAKHLDT
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QQYHDRKQRE ARMSMSREER TKTPFVDYLK PIIADGDTGF GGTTATVKLC KLFVERGAAG
201: VHIEDQSSVT KKCGHMAGKV LVAVSEHINR LVAARLQFDV MGTETVLVAR TDAVAATLIQ SNIDARDHQF ILGATNPSLR GKSLSSLLAE GMTVGKNGPA
301: LQSIEDQWLG SAGLMTFSEA VVQAIKRMNL NENEKNQRLS EWLTHARYEN CLSNEQGRVL AAKLGVTDLF WDWDLPRTRE GFYRFQGSVA AAVVRGWAFA
401: QIADIIWMET ASPDLNECTQ FAEGIKSKTP EVMLAYNLSP SFNWDASGMT DQQMVEFIPR IARLGYCWQF ITLAGFHADA LVVDTFAKDY ARRGMLAYVE
501: RIQREERTHG VDTLAHQKWS GANYYDRYLK TVQGGISSTA AMGKGVTEEQ FKESWTRPGA DGMGEGTSLV VAKSRM
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QQYHDRKQRE ARMSMSREER TKTPFVDYLK PIIADGDTGF GGTTATVKLC KLFVERGAAG
201: VHIEDQSSVT KKCGHMAGKV LVAVSEHINR LVAARLQFDV MGTETVLVAR TDAVAATLIQ SNIDARDHQF ILGATNPSLR GKSLSSLLAE GMTVGKNGPA
301: LQSIEDQWLG SAGLMTFSEA VVQAIKRMNL NENEKNQRLS EWLTHARYEN CLSNEQGRVL AAKLGVTDLF WDWDLPRTRE GFYRFQGSVA AAVVRGWAFA
401: QIADIIWMET ASPDLNECTQ FAEGIKSKTP EVMLAYNLSP SFNWDASGMT DQQMVEFIPR IARLGYCWQF ITLAGFHADA LVVDTFAKDY ARRGMLAYVE
501: RIQREERTHG VDTLAHQKWS GANYYDRYLK TVQGGISSTA AMGKGVTEEQ FKESWTRPGA DGMGEGTSLV VAKSRM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.