Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G219100.1 | Wheat | peroxisome | 98.77 | 98.77 |
| HORVU2Hr1G045340.1 | Barley | peroxisome | 98.07 | 98.07 |
| Os07t0529000-01 | Rice | peroxisome, plasma membrane, plastid | 91.58 | 91.26 |
| TraesCS2B01G244600.1 | Wheat | peroxisome | 98.25 | 90.03 |
| EER99471 | Sorghum | peroxisome | 89.12 | 88.5 |
| Zm00001d021666_P001 | Maize | peroxisome | 87.02 | 85.37 |
| KRH57633 | Soybean | peroxisome | 17.37 | 80.49 |
| GSMUA_Achr9P11850_001 | Banana | peroxisome | 76.32 | 78.1 |
| Solyc07g052480.2.1 | Tomato | extracellular, nucleus, peroxisome | 78.77 | 78.09 |
| CDY33135 | Canola | peroxisome | 10.0 | 78.08 |
| Bra001843.1-P | Field mustard | peroxisome | 73.33 | 77.7 |
| VIT_12s0059g02350.t01 | Wine grape | peroxisome | 78.07 | 77.26 |
| CDY38634 | Canola | peroxisome | 77.89 | 77.08 |
| AT3G21720.1 | Thale cress | peroxisome | 77.89 | 77.08 |
| PGSC0003DMT400065512 | Potato | peroxisome | 77.72 | 77.04 |
| Bra031301.1-P | Field mustard | peroxisome | 76.32 | 76.99 |
| CDY24258 | Canola | peroxisome | 77.72 | 76.91 |
| CDX92920 | Canola | peroxisome | 77.72 | 76.91 |
| CDY33134 | Canola | peroxisome | 64.39 | 75.98 |
| KRH56100 | Soybean | peroxisome | 75.09 | 74.31 |
| KRH25405 | Soybean | peroxisome | 74.91 | 74.26 |
Protein Annotations
| KEGG:00630+4.1.3.1 | Gene3D:1.10.10.850 | Gene3D:3.20.20.60 | MapMan:5.7.3.6.3 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004451 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009514 | GO:GO:0009987 | GO:GO:0019752 | InterPro:Isocitrate_lyase |
| InterPro:Isocitrate_lyase_ph_CS | PFAM:PF00463 | PIRSF:PIRSF001362 | ScanProsite:PS00161 | PANTHER:PTHR21631 | PANTHER:PTHR21631:SF26 |
| InterPro:Pyrv/PenolPyrv_Kinase-like_dom | SUPFAM:SSF51621 | TIGRFAMs:TIGR01346 | EnsemblPlantsGene:TraesCS2D01G224200 | EnsemblPlants:TraesCS2D01G224200.1 | TIGR:cd00377 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:191237431..191239455
Molecular Weight (calculated)
63054.7 Da
IEP (calculated)
7.099
GRAVY (calculated)
-0.296
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPLSVPSL IMEEEGRFEA EVAEVGAWWN TERFRLTKRP YTARDVVLLR GTLRQSYASG EMAKKLWRTL KAHQAAGTAS RTFGALDPVQ VTMMAKHLDT
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QQYHDRKQQE ARMSLPRAER AHAPFVDFLK PIIADGDTGF GGATATVKLC KLFVERGAAG
201: VHLEDQSSVT KKCGHMAGKV LVAVSEHVNR LVAARLQFDI MGVETVLVAR TDAVAATLIQ TNIDARDHQF ILGATNPRLK NRSLTAMLSD AMSAGKNGRE
301: LQAIEDEWTA TAQLKTFSEC VKDAIASLNT TDLEKQRKLQ EWSNATSYDK CVSHEQARDI AAGLGVGSVF WDWDLPRTRE GFYRFQGSVA SAVVRGRAFA
401: PHADVLWMET SSPNIAECTA FAEGVRAAFP EAMLAYNLSP SFNWDASGMT DADMAAFIPH VARLGYVWQF ITLAGFHADA LVTDTFARDF ARRGMLAYVE
501: RIQREERRNG VETLEHQKWS GANFYDRVLK TVQGGMSSTA AMGKGATEEQ FWTKPGSESS SQHVLAKSRM
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QQYHDRKQQE ARMSLPRAER AHAPFVDFLK PIIADGDTGF GGATATVKLC KLFVERGAAG
201: VHLEDQSSVT KKCGHMAGKV LVAVSEHVNR LVAARLQFDI MGVETVLVAR TDAVAATLIQ TNIDARDHQF ILGATNPRLK NRSLTAMLSD AMSAGKNGRE
301: LQAIEDEWTA TAQLKTFSEC VKDAIASLNT TDLEKQRKLQ EWSNATSYDK CVSHEQARDI AAGLGVGSVF WDWDLPRTRE GFYRFQGSVA SAVVRGRAFA
401: PHADVLWMET SSPNIAECTA FAEGVRAAFP EAMLAYNLSP SFNWDASGMT DADMAAFIPH VARLGYVWQF ITLAGFHADA LVTDTFARDF ARRGMLAYVE
501: RIQREERRNG VETLEHQKWS GANFYDRVLK TVQGGMSSTA AMGKGATEEQ FWTKPGSESS SQHVLAKSRM
001: MAASFSVPSM IMEEEGRFEA EVAEVQTWWS SERFKLTRRP YTARDVVALR GHLKQGYASN EMAKKLWRTL KSHQANGTAS RTFGALDPVQ VTMMAKHLDT
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QQYHDRKQRE ARMSMSREER TKTPFVDYLK PIIADGDTGF GGTTATVKLC KLFVERGAAG
201: VHIEDQSSVT KKCGHMAGKV LVAVSEHINR LVAARLQFDV MGTETVLVAR TDAVAATLIQ SNIDARDHQF ILGATNPSLR GKSLSSLLAE GMTVGKNGPA
301: LQSIEDQWLG SAGLMTFSEA VVQAIKRMNL NENEKNQRLS EWLTHARYEN CLSNEQGRVL AAKLGVTDLF WDWDLPRTRE GFYRFQGSVA AAVVRGWAFA
401: QIADIIWMET ASPDLNECTQ FAEGIKSKTP EVMLAYNLSP SFNWDASGMT DQQMVEFIPR IARLGYCWQF ITLAGFHADA LVVDTFAKDY ARRGMLAYVE
501: RIQREERTHG VDTLAHQKWS GANYYDRYLK TVQGGISSTA AMGKGVTEEQ FKESWTRPGA DGMGEGTSLV VAKSRM
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QQYHDRKQRE ARMSMSREER TKTPFVDYLK PIIADGDTGF GGTTATVKLC KLFVERGAAG
201: VHIEDQSSVT KKCGHMAGKV LVAVSEHINR LVAARLQFDV MGTETVLVAR TDAVAATLIQ SNIDARDHQF ILGATNPSLR GKSLSSLLAE GMTVGKNGPA
301: LQSIEDQWLG SAGLMTFSEA VVQAIKRMNL NENEKNQRLS EWLTHARYEN CLSNEQGRVL AAKLGVTDLF WDWDLPRTRE GFYRFQGSVA AAVVRGWAFA
401: QIADIIWMET ASPDLNECTQ FAEGIKSKTP EVMLAYNLSP SFNWDASGMT DQQMVEFIPR IARLGYCWQF ITLAGFHADA LVVDTFAKDY ARRGMLAYVE
501: RIQREERTHG VDTLAHQKWS GANYYDRYLK TVQGGISSTA AMGKGVTEEQ FKESWTRPGA DGMGEGTSLV VAKSRM
Arabidopsis Description
ICLIsocitrate lyase [Source:UniProtKB/Swiss-Prot;Acc:P28297]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.