Factsheet for Zm00001d021666_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001
Zm00001d003470_P001
Zm00001d021666_P001
Zm00001d025574_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21720.1	Zm00001d000055_P001	AT2G01950.1	19000166
AT3G21720.1	Zm00001d021666_P001	AT3G21720.1	21798944
AT3G21720.1	Zm00001d003470_P001	AT4G22240.1	21798944
AT3G21720.1	Zm00001d025574_P001	AT4G22240.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99471	Sorghum	peroxisome	91.39	92.51
TraesCS2D01G224200.1	Wheat	peroxisome	85.37	87.02
TraesCS2A01G219100.1	Wheat	peroxisome	85.03	86.67
HORVU2Hr1G045340.1	Barley	peroxisome	85.03	86.67
Os07t0529000-01	Rice	peroxisome, plasma membrane, plastid	85.03	86.36
TraesCS2B01G244600.1	Wheat	peroxisome	85.37	79.74
CDY33135	Canola	peroxisome	9.98	79.45
KRH57633	Soybean	peroxisome	16.52	78.05
GSMUA_Achr9P11850_001	Banana	peroxisome	74.53	77.74
Bra001843.1-P	Field mustard	peroxisome	71.94	77.7
VIT_12s0059g02350.t01	Wine grape	peroxisome	75.39	76.04
AT3G21720.1	Thale cress	peroxisome	75.04	75.69
Solyc07g052480.2.1	Tomato	extracellular, nucleus, peroxisome	74.7	75.48
CDY38634	Canola	peroxisome	74.7	75.35
CDY24258	Canola	peroxisome	74.53	75.17
CDX92920	Canola	peroxisome	74.53	75.17
Bra031301.1-P	Field mustard	peroxisome	72.98	75.04
PGSC0003DMT400065512	Potato	peroxisome	73.84	74.61
CDY33134	Canola	peroxisome	61.27	73.71
KRH25405	Soybean	peroxisome	72.12	72.87
KRH56100	Soybean	peroxisome	71.94	72.57

Protein Annotations

KEGG:00630+4.1.3.1	Gene3D:1.10.10.850	Gene3D:3.20.20.60	MapMan:5.7.3.6.3	UniProt:A0A1D6IDT8	GO:GO:0003674
GO:GO:0003824	GO:GO:0004451	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	GO:GO:0009514	GO:GO:0009987
GO:GO:0016829	GO:GO:0019752	GO:GO:0046872	InterPro:Isocitrate_lyase	InterPro:Isocitrate_lyase_ph_CS	ProteinID:ONM57948.1
PFAM:PF00463	PIRSF:PIRSF001362	ScanProsite:PS00161	PANTHER:PTHR21631	PANTHER:PTHR21631:SF26	InterPro:Pyrv/PenolPyrv_Kinase-like_dom
SUPFAM:SSF51621	TIGRFAMs:TIGR01346	UniParc:UPI000844C3A5	EnsemblPlantsGene:Zm00001d021666	EnsemblPlants:Zm00001d021666_P001	EnsemblPlants:Zm00001d021666_T001
SEG:seg	:	:	:	:	:

Description

isocitrate lyase1 isocitrate lyase1

Coordinates

chr7:-:159493893..159495965

Molecular Weight (calculated)

63721.5 Da

IEP (calculated)

6.838

GRAVY (calculated)

-0.231

Length

581 amino acids

Sequence
(BLAST)

001: MASPFSVPSL IMEEEGRFEA EVAEVESWWG TERFRLTKRP YTARDVVLLR GTLRQSYASG EMAKKLWRTL KAHQAGGTAS RTFGALDPVQ VTMMAKHLDT
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QLYHDRKQRE ARMSLPRAER ARAPYVDFLK PIIADGDTGF GGATATVKLC KLFVERGAAG
201: VHLEDQSSVT KKCGHMAGKV LVAVSEHVNR LVAARLQFDV MGVETVLVAR TDAVAATLIQ TNVDARDHQF IVGATNPGLR GQSLAAVLSA GMSAGKSGRE
301: LQAIEDEWLA AAQLKTFSEC VRDAIAGLGV AAKEKQRRLQ EWDRATGGYD RCVSNDQARD IAASLGVTSV FWDWDLPRTR EGFYRFRGSV AAAVVRGRAF
401: APHADVLWME TSSPNVAECT AFSEGVKAAC PEAMLAYNLS PSFNWDASGM TDAEMAAFIP SVARLGYVWQ FITLAGFHAD ALVTDTFARD FARRGMLAYV
501: ERIQREERIN GVETLEHQKW SGANFYDRVL KAVQGGISST AAMGKGKELL KSSSRIHGPQ LGAVACKLWP NPGFDEDSEE E

Best Arabidopsis Sequence Match ( AT3G21720.1 )
(BLAST)

001: MAASFSVPSM IMEEEGRFEA EVAEVQTWWS SERFKLTRRP YTARDVVALR GHLKQGYASN EMAKKLWRTL KSHQANGTAS RTFGALDPVQ VTMMAKHLDT
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QQYHDRKQRE ARMSMSREER TKTPFVDYLK PIIADGDTGF GGTTATVKLC KLFVERGAAG
201: VHIEDQSSVT KKCGHMAGKV LVAVSEHINR LVAARLQFDV MGTETVLVAR TDAVAATLIQ SNIDARDHQF ILGATNPSLR GKSLSSLLAE GMTVGKNGPA
301: LQSIEDQWLG SAGLMTFSEA VVQAIKRMNL NENEKNQRLS EWLTHARYEN CLSNEQGRVL AAKLGVTDLF WDWDLPRTRE GFYRFQGSVA AAVVRGWAFA
401: QIADIIWMET ASPDLNECTQ FAEGIKSKTP EVMLAYNLSP SFNWDASGMT DQQMVEFIPR IARLGYCWQF ITLAGFHADA LVVDTFAKDY ARRGMLAYVE
501: RIQREERTHG VDTLAHQKWS GANYYDRYLK TVQGGISSTA AMGKGVTEEQ FKESWTRPGA DGMGEGTSLV VAKSRM

Arabidopsis Description

ICLIsocitrate lyase [Source:UniProtKB/Swiss-Prot;Acc:P28297]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.