CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER99471
EES12270
OQU92006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21720.1	OQU92006	AT2G01950.1	19000166
AT3G21720.1	EER99471	AT3G21720.1	21798944
AT3G21720.1	EES12270	AT4G22240.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021666_P001	Maize	peroxisome	92.51	91.39
TraesCS2D01G224200.1	Wheat	peroxisome	88.5	89.12
Os07t0529000-01	Rice	peroxisome, plasma membrane, plastid	88.5	88.81
HORVU2Hr1G045340.1	Barley	peroxisome	87.8	88.42
TraesCS2A01G219100.1	Wheat	peroxisome	87.63	88.25
TraesCS2B01G244600.1	Wheat	peroxisome	88.15	81.35
Bra001843.1-P	Field mustard	peroxisome	74.22	79.18
CDY38634	Canola	peroxisome	78.4	78.12
CDX92920	Canola	peroxisome	78.4	78.12
CDY33135	Canola	peroxisome	9.93	78.08
Bra031301.1-P	Field mustard	peroxisome	76.83	78.05
KRH57633	Soybean	peroxisome	16.72	78.05
GSMUA_Achr9P11850_001	Banana	peroxisome	75.61	77.92
CDY24258	Canola	peroxisome	78.05	77.78
VIT_12s0059g02350.t01	Wine grape	peroxisome	77.87	77.6
AT3G21720.1	Thale cress	peroxisome	77.53	77.26
CDY33134	Canola	peroxisome	64.98	77.23
Solyc07g052480.2.1	Tomato	extracellular, nucleus, peroxisome	77.35	77.22
PGSC0003DMT400065512	Potato	peroxisome	76.48	76.35
KRH56100	Soybean	peroxisome	74.56	74.31
KRH25405	Soybean	peroxisome	74.39	74.26

Protein Annotations

KEGG:00630+4.1.3.1	Gene3D:1.10.10.850	Gene3D:3.20.20.60	MapMan:5.7.3.6.3	EntrezGene:8084064	UniProt:C5XA58
EnsemblPlants:EER99471	ProteinID:EER99471	ProteinID:EER99471.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004451
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0008150	GO:GO:0008152	GO:GO:0009514	GO:GO:0009987	GO:GO:0016829	GO:GO:0019752
GO:GO:0046872	InterPro:Isocitrate_lyase	InterPro:Isocitrate_lyase_ph_CS	PFAM:PF00463	PIRSF:PIRSF001362	ScanProsite:PS00161
PANTHER:PTHR21631	PANTHER:PTHR21631:SF26	MetaCyc:PWY-6969	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	EnsemblPlantsGene:SORBI_3002G324000	SUPFAM:SSF51621
unigene:Sbi.3655	TIGRFAMs:TIGR01346	UniParc:UPI0001A840D7	RefSeq:XP_002462950.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:69488429..69490758

Molecular Weight (calculated)

62984.7 Da

IEP (calculated)

7.343

GRAVY (calculated)

-0.233

Length

574 amino acids

Sequence
(BLAST)

001: MPSPFSVPSL IMEEEGRFEA EVAEVESWWT TERFRLTKRP YTARDVVLLR GTLRQSYASG EMAKKLWRTL KAHQAGGTAS RTFGALDPVQ VTMMAKHLDT
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QLYHDRKQRE ARMSLPRADR ARAPYVDFLK PIIADGDTGF GGATATVKLC KLFVERGAAG
201: VHLEDQSSVT KKCGHMAGKV LVAVSEHVNR LVAARLQFDV MGVETVLVAR TDAVAATLIQ TNVDARDHQF ILGATNPRLR GQSLAAVLSD GMAAGKNGRE
301: LQAIEDEWLA AAQLKTFSDC VRDAIAGLAV SAQEKQRRVQ EWDRATGAGG YDRCVSNEQA RDIAAGLGVA SVFWDWDLPR TREGFYRFRG SVGAAVVRGR
401: AFAPHADVLW METSSPNVAE CTAFAEGVKA ACPEAMLAYN LSPSFNWDAS GMTDAEMAAF IPSVARLGYV WQFITLAGFH ADALVTDTFA RDFARRGMLA
501: YVERIQREER INGVETLEHQ KWSGANFYDR VLKTVQGGIS STAAMGKGVT EEQFKDSRPA TGSSGLQVMA KSRI

Best Arabidopsis Sequence Match ( AT3G21720.1 )
(BLAST)

001: MAASFSVPSM IMEEEGRFEA EVAEVQTWWS SERFKLTRRP YTARDVVALR GHLKQGYASN EMAKKLWRTL KSHQANGTAS RTFGALDPVQ VTMMAKHLDT
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QQYHDRKQRE ARMSMSREER TKTPFVDYLK PIIADGDTGF GGTTATVKLC KLFVERGAAG
201: VHIEDQSSVT KKCGHMAGKV LVAVSEHINR LVAARLQFDV MGTETVLVAR TDAVAATLIQ SNIDARDHQF ILGATNPSLR GKSLSSLLAE GMTVGKNGPA
301: LQSIEDQWLG SAGLMTFSEA VVQAIKRMNL NENEKNQRLS EWLTHARYEN CLSNEQGRVL AAKLGVTDLF WDWDLPRTRE GFYRFQGSVA AAVVRGWAFA
401: QIADIIWMET ASPDLNECTQ FAEGIKSKTP EVMLAYNLSP SFNWDASGMT DQQMVEFIPR IARLGYCWQF ITLAGFHADA LVVDTFAKDY ARRGMLAYVE
501: RIQREERTHG VDTLAHQKWS GANYYDRYLK TVQGGISSTA AMGKGVTEEQ FKESWTRPGA DGMGEGTSLV VAKSRM

Arabidopsis Description

ICLIsocitrate lyase [Source:UniProtKB/Swiss-Prot;Acc:P28297]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.