Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G045340.1 | Barley | peroxisome | 90.35 | 98.6 |
| TraesCS2D01G224200.1 | Wheat | peroxisome | 90.03 | 98.25 |
| TraesCS2A01G219100.1 | Wheat | peroxisome | 89.87 | 98.07 |
| Os07t0529000-01 | Rice | peroxisome, plasma membrane, plastid | 83.44 | 90.73 |
| EER99471 | Sorghum | peroxisome | 81.35 | 88.15 |
| Zm00001d021666_P001 | Maize | peroxisome | 79.74 | 85.37 |
| KRH57633 | Soybean | peroxisome | 15.92 | 80.49 |
| CDY33135 | Canola | peroxisome | 9.16 | 78.08 |
| Solyc07g052480.2.1 | Tomato | extracellular, nucleus, peroxisome | 71.86 | 77.74 |
| GSMUA_Achr9P11850_001 | Banana | peroxisome | 69.61 | 77.74 |
| Bra001843.1-P | Field mustard | peroxisome | 67.04 | 77.51 |
| AT3G21720.1 | Thale cress | peroxisome | 71.38 | 77.08 |
| CDY38634 | Canola | peroxisome | 71.22 | 76.91 |
| CDY24258 | Canola | peroxisome | 71.22 | 76.91 |
| CDX92920 | Canola | peroxisome | 71.22 | 76.91 |
| VIT_12s0059g02350.t01 | Wine grape | peroxisome | 71.22 | 76.91 |
| PGSC0003DMT400065512 | Potato | peroxisome | 71.06 | 76.87 |
| Bra031301.1-P | Field mustard | peroxisome | 69.77 | 76.81 |
| CDY33134 | Canola | peroxisome | 58.84 | 75.78 |
| KRH56100 | Soybean | peroxisome | 68.81 | 74.31 |
| KRH25405 | Soybean | peroxisome | 68.65 | 74.26 |
Protein Annotations
| KEGG:00630+4.1.3.1 | Gene3D:1.10.10.850 | Gene3D:3.20.20.60 | MapMan:5.7.3.6.3 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004451 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009514 | GO:GO:0009987 | GO:GO:0019752 | InterPro:Isocitrate_lyase |
| InterPro:Isocitrate_lyase_ph_CS | PFAM:PF00463 | PIRSF:PIRSF001362 | ScanProsite:PS00161 | PANTHER:PTHR21631 | PANTHER:PTHR21631:SF26 |
| InterPro:Pyrv/PenolPyrv_Kinase-like_dom | SUPFAM:SSF51621 | TIGRFAMs:TIGR01346 | EnsemblPlantsGene:TraesCS2B01G244600 | EnsemblPlants:TraesCS2B01G244600.1 | TIGR:cd00377 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:248655270..248657469
Molecular Weight (calculated)
68898.6 Da
IEP (calculated)
7.118
GRAVY (calculated)
-0.329
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPDATMHHA RTHEESSHLI RINTVGFRGE AEPCTHLHSF DPPILQVPEL KAMASPFSAP SLIMEEEGRF EAEVAEVGAW WNTERFRLTK RPYTARDVVL
101: LRGTLRQSYA SGEMAKKLWR TLKAHQAGGT ASRTFGALDP VQVTMMAKHL DTIYVSGWQC SSTHTSTNEP GPDLADYPYD TVPNKVEHLF FAQQYHDRKQ
201: QEARMSLPRA ERAHAPFVDF LKPIIADGDT GFGGATATVK LCKLFVERGA AGVHLEDQSS VTKKCGHMAG KVLVAVSEHV NRLVAARLQF DIMGVETVLV
301: ARTDAVAATL IQTNIDARDH QFILGATNPR LKNRSLTAML SDAMSAGKNG RELQAIEDEW TATAQLKTFS ECVKDAIARL NSTDLDKQRK LQEWSKATSY
401: DKCVSHEQAR DIAASLGVGS VFWDWDLPRT REGFYRFQGS VASAVVRGRA FAPHADVLWM ETSSPNIAEC TAFAEGVRAA FPEAMLAYNL SPSFNWDASG
501: MTDADMAAFI PHVAKLGYVW QFITLAGFHA DALVTDTFAR DFARRGMLAY VERIQREERR NGVETLEHQK WSGANFYDRV LKTVQGGMSS TAAMGKGATE
601: EQFWTKPGSE GSSQHVLAKS RM
101: LRGTLRQSYA SGEMAKKLWR TLKAHQAGGT ASRTFGALDP VQVTMMAKHL DTIYVSGWQC SSTHTSTNEP GPDLADYPYD TVPNKVEHLF FAQQYHDRKQ
201: QEARMSLPRA ERAHAPFVDF LKPIIADGDT GFGGATATVK LCKLFVERGA AGVHLEDQSS VTKKCGHMAG KVLVAVSEHV NRLVAARLQF DIMGVETVLV
301: ARTDAVAATL IQTNIDARDH QFILGATNPR LKNRSLTAML SDAMSAGKNG RELQAIEDEW TATAQLKTFS ECVKDAIARL NSTDLDKQRK LQEWSKATSY
401: DKCVSHEQAR DIAASLGVGS VFWDWDLPRT REGFYRFQGS VASAVVRGRA FAPHADVLWM ETSSPNIAEC TAFAEGVRAA FPEAMLAYNL SPSFNWDASG
501: MTDADMAAFI PHVAKLGYVW QFITLAGFHA DALVTDTFAR DFARRGMLAY VERIQREERR NGVETLEHQK WSGANFYDRV LKTVQGGMSS TAAMGKGATE
601: EQFWTKPGSE GSSQHVLAKS RM
001: MAASFSVPSM IMEEEGRFEA EVAEVQTWWS SERFKLTRRP YTARDVVALR GHLKQGYASN EMAKKLWRTL KSHQANGTAS RTFGALDPVQ VTMMAKHLDT
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QQYHDRKQRE ARMSMSREER TKTPFVDYLK PIIADGDTGF GGTTATVKLC KLFVERGAAG
201: VHIEDQSSVT KKCGHMAGKV LVAVSEHINR LVAARLQFDV MGTETVLVAR TDAVAATLIQ SNIDARDHQF ILGATNPSLR GKSLSSLLAE GMTVGKNGPA
301: LQSIEDQWLG SAGLMTFSEA VVQAIKRMNL NENEKNQRLS EWLTHARYEN CLSNEQGRVL AAKLGVTDLF WDWDLPRTRE GFYRFQGSVA AAVVRGWAFA
401: QIADIIWMET ASPDLNECTQ FAEGIKSKTP EVMLAYNLSP SFNWDASGMT DQQMVEFIPR IARLGYCWQF ITLAGFHADA LVVDTFAKDY ARRGMLAYVE
501: RIQREERTHG VDTLAHQKWS GANYYDRYLK TVQGGISSTA AMGKGVTEEQ FKESWTRPGA DGMGEGTSLV VAKSRM
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QQYHDRKQRE ARMSMSREER TKTPFVDYLK PIIADGDTGF GGTTATVKLC KLFVERGAAG
201: VHIEDQSSVT KKCGHMAGKV LVAVSEHINR LVAARLQFDV MGTETVLVAR TDAVAATLIQ SNIDARDHQF ILGATNPSLR GKSLSSLLAE GMTVGKNGPA
301: LQSIEDQWLG SAGLMTFSEA VVQAIKRMNL NENEKNQRLS EWLTHARYEN CLSNEQGRVL AAKLGVTDLF WDWDLPRTRE GFYRFQGSVA AAVVRGWAFA
401: QIADIIWMET ASPDLNECTQ FAEGIKSKTP EVMLAYNLSP SFNWDASGMT DQQMVEFIPR IARLGYCWQF ITLAGFHADA LVVDTFAKDY ARRGMLAYVE
501: RIQREERTHG VDTLAHQKWS GANYYDRYLK TVQGGISSTA AMGKGVTEEQ FKESWTRPGA DGMGEGTSLV VAKSRM
Arabidopsis Description
ICLIsocitrate lyase [Source:UniProtKB/Swiss-Prot;Acc:P28297]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.