Factsheet for HORVU2Hr1G045340.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome
BaCelLo:	nucleus
EpiLoc:	peroxisome
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G012460.1
HORVU2Hr1G045340.1
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21720.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166
AT3G21720.1	HORVU2Hr1G045340.1	AT3G21720.1	21798944
AT3G21720.1	HORVU0Hr1G012460.1	AT4G22240.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G224200.1	Wheat	peroxisome	98.07	98.07
TraesCS2A01G219100.1	Wheat	peroxisome	97.89	97.89
Os07t0529000-01	Rice	peroxisome, plasma membrane, plastid	91.05	90.73
TraesCS2B01G244600.1	Wheat	peroxisome	98.6	90.35
EER99471	Sorghum	peroxisome	88.42	87.8
Zm00001d021666_P001	Maize	peroxisome	86.67	85.03
KRH57633	Soybean	peroxisome	17.37	80.49
GSMUA_Achr9P11850_001	Banana	peroxisome	76.32	78.1
Solyc07g052480.2.1	Tomato	extracellular, nucleus, peroxisome	78.77	78.09
CDY33135	Canola	peroxisome	10.0	78.08
Bra001843.1-P	Field mustard	peroxisome	72.98	77.32
PGSC0003DMT400065512	Potato	peroxisome	77.89	77.22
VIT_12s0059g02350.t01	Wine grape	peroxisome	77.89	77.08
CDY38634	Canola	peroxisome	77.72	76.91
AT3G21720.1	Thale cress	peroxisome	77.72	76.91
Bra031301.1-P	Field mustard	peroxisome	76.14	76.81
CDY24258	Canola	peroxisome	77.54	76.74
CDX92920	Canola	peroxisome	77.54	76.74
CDY33134	Canola	peroxisome	64.21	75.78
KRH56100	Soybean	peroxisome	75.09	74.31
KRH25405	Soybean	peroxisome	74.91	74.26

Protein Annotations

KEGG:00630+4.1.3.1	Gene3D:1.10.10.850	Gene3D:3.20.20.60	MapMan:5.7.3.6.3	GO:GO:0003674	GO:GO:0003824
GO:GO:0004451	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	GO:GO:0009514	GO:GO:0009987	GO:GO:0016829
GO:GO:0019752	GO:GO:0046872	EnsemblPlantsGene:HORVU2Hr1G045340	EnsemblPlants:HORVU2Hr1G045340.1	InterPro:Isocitrate_lyase	InterPro:Isocitrate_lyase_ph_CS
UniProt:M0VN24	PFAM:PF00463	PIRSF:PIRSF001362	ScanProsite:PS00161	PANTHER:PTHR21631	PANTHER:PTHR21631:SF26
InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	TIGRFAMs:TIGR01346	UniParc:UPI0002968EBE	SEG:seg	:

Description

Isocitrate lyase [Source:UniProtKB/TrEMBL;Acc:M0VN24]

Coordinates

chrchr2H:+:237275202..237277530

Molecular Weight (calculated)

63096.7 Da

IEP (calculated)

7.098

GRAVY (calculated)

-0.313

Length

570 amino acids

Sequence
(BLAST)

001: MASPFSAPSL IMEEEGRFEA EVAEVGAWWN TERFRLTKRP YTARDVVLLR GTLRQSYASG EMAKKLWRTL KAHQAGGTAS RTFGALDPVQ VTMMAKHLDT
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QQYHDRKQQE ARMSLPRAER AHAPFVDFLK PIIADGDTGF GGATATVKLC KLFVERGAAG
201: VHLEDQSSVT KKCGHMAGKV LVAVSEHVNR LVAARLQFDI MGVETVLVAR TDAVAATLIQ TNIDARDHQF ILGATNPRLK NRSLTTMLSD AMSAGKNGRE
301: LQAIEDEWTA TAQLKTFSEC VKDAIASLNA TDMDKQRKLQ EWSNATSYDK CVSHEQARDI AASLGVGSVF WDWDLPRTRE GFYRFQGSVA SAVVRGRAFA
401: PHADVLWMET SSPNIAECTA FAEGVRATFP EAMLAYNLSP SFNWDASGMT DADMAAFIPH VAKLGYVWQF ITLAGFHADA LVTDTFARDF ARRGMLAYVE
501: RIQREERRNG VETLEHQKWS GANFYDRVLK TVQGGMSSTA AMGKGATEEQ FWTKPGSESS TQHVLAKSRM

Best Arabidopsis Sequence Match ( AT3G21720.1 )
(BLAST)

001: MAASFSVPSM IMEEEGRFEA EVAEVQTWWS SERFKLTRRP YTARDVVALR GHLKQGYASN EMAKKLWRTL KSHQANGTAS RTFGALDPVQ VTMMAKHLDT
101: IYVSGWQCSS THTSTNEPGP DLADYPYDTV PNKVEHLFFA QQYHDRKQRE ARMSMSREER TKTPFVDYLK PIIADGDTGF GGTTATVKLC KLFVERGAAG
201: VHIEDQSSVT KKCGHMAGKV LVAVSEHINR LVAARLQFDV MGTETVLVAR TDAVAATLIQ SNIDARDHQF ILGATNPSLR GKSLSSLLAE GMTVGKNGPA
301: LQSIEDQWLG SAGLMTFSEA VVQAIKRMNL NENEKNQRLS EWLTHARYEN CLSNEQGRVL AAKLGVTDLF WDWDLPRTRE GFYRFQGSVA AAVVRGWAFA
401: QIADIIWMET ASPDLNECTQ FAEGIKSKTP EVMLAYNLSP SFNWDASGMT DQQMVEFIPR IARLGYCWQF ITLAGFHADA LVVDTFAKDY ARRGMLAYVE
501: RIQREERTHG VDTLAHQKWS GANYYDRYLK TVQGGISSTA AMGKGVTEEQ FKESWTRPGA DGMGEGTSLV VAKSRM

Arabidopsis Description

ICLIsocitrate lyase [Source:UniProtKB/Swiss-Prot;Acc:P28297]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.