Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88809 | Canola | nucleus | 96.7 | 96.97 |
| Bra002390.1-P | Field mustard | mitochondrion | 16.21 | 79.73 |
| Bra002391.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 32.14 | 69.23 |
| AT5G22120.1 | Thale cress | nucleus | 71.7 | 68.15 |
| Bra006611.1-P | Field mustard | cytosol | 21.7 | 58.96 |
| KRG89675 | Soybean | extracellular | 12.64 | 50.55 |
| KRH25322 | Soybean | cytosol, nucleus, plastid | 48.35 | 49.3 |
| KRG88868 | Soybean | nucleus | 49.45 | 49.18 |
| Solyc06g074130.2.1 | Tomato | nucleus | 45.88 | 48.27 |
| VIT_06s0004g07340.t01 | Wine grape | nucleus | 35.71 | 46.93 |
| PGSC0003DMT400015182 | Potato | nucleus | 45.6 | 46.89 |
| Os01t0965600-01 | Rice | nucleus | 32.14 | 44.49 |
| EES19096 | Sorghum | nucleus | 42.58 | 42.7 |
| TraesCS3A01G513800.1 | Wheat | nucleus | 42.86 | 42.05 |
| TraesCS3B01G582500.1 | Wheat | cytosol, mitochondrion, nucleus | 42.86 | 41.94 |
| Zm00001d037530_P002 | Maize | nucleus | 41.76 | 41.87 |
| KXG34199 | Sorghum | nucleus | 42.03 | 41.8 |
| TraesCS3D01G521500.1 | Wheat | nucleus | 42.03 | 41.35 |
| GSMUA_Achr10P... | Banana | cytosol | 43.41 | 41.25 |
| VIT_06s0009g00340.t01 | Wine grape | nucleus | 37.64 | 40.41 |
| HORVU3Hr1G112760.2 | Barley | cytosol, nucleus | 42.86 | 39.9 |
Protein Annotations
| EnsemblPlants:Bra006612.1 | EnsemblPlants:Bra006612.1-P | EnsemblPlantsGene:Bra006612 | Gene3D:3.30.70.330 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf |
| PANTHER:PTHR21678 | PANTHER:PTHR21678:SF0 | SEG:seg | UniParc:UPI00025400D1 | UniProt:M4CQX1 | MapMan:35.2 |
Description
AT5G22120 (E=1e-133) | unknown protein
Coordinates
chrA03:-:4271896..4273662
Molecular Weight (calculated)
39944.0 Da
IEP (calculated)
4.615
GRAVY (calculated)
-0.696
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKRENEDE PNWSERVEDL VASGDVAAAI SFLESLTTSL QSRIGSSSSS SSSSTELGLQ LAAALTQLAN LYSSQGLSLK SDELLTRSSL VKQRALDHDL
101: ASSRGSCDAE NQTKTSDSNV DGCSSSECPL NSTKDDASDD DWEALADREP NTLLSVDELP QISKLSVEEP KIEGPKRRGR GNFTYNKDVM YSESRFEDSG
201: DNDMSRGGLE KTDESLKAKY GTRHVLVLAD FSPNLRTTDL ERLFVDFKDS GFLIRWVNDT TALAVFKTPS TAQEACKSVQ CSFTIRVLDD HDSLLGSISG
301: KDLEPPSQRP KTSARTAQRL IAHSMGLKLP ASGFGPKELR DQEAARKSRI VSRQKQRDDA WGDD
101: ASSRGSCDAE NQTKTSDSNV DGCSSSECPL NSTKDDASDD DWEALADREP NTLLSVDELP QISKLSVEEP KIEGPKRRGR GNFTYNKDVM YSESRFEDSG
201: DNDMSRGGLE KTDESLKAKY GTRHVLVLAD FSPNLRTTDL ERLFVDFKDS GFLIRWVNDT TALAVFKTPS TAQEACKSVQ CSFTIRVLDD HDSLLGSISG
301: KDLEPPSQRP KTSARTAQRL IAHSMGLKLP ASGFGPKELR DQEAARKSRI VSRQKQRDDA WGDD
001: MENTRPNEEE GRISEPNWSE RVEDLVVAGD VTAAISFLES LETNLQSRLG SSSSGERTEF GLQLSAALTQ LADLYSSEGL SLKSDELRTR SSLIKQRALD
101: CDLASSRSSG NVENQSVASS GLKSDPNVSS FDADGKTEDS KVSSSNSAAH DSSDDDWEAL ADVEPSKLLP VEELPEISKL SVEEPKVQGP KRRGRGTFTY
201: KSDAMYSDRD FSESRFDDDS EDNDLSRESE KTDESLKSKY GTRHVLVLAG FSPSLRTTEL EKLFKDFKDS GFIIRWVNDT TALAVFKTPS AALEACKHVQ
301: CSFTIRVLDD NDSLLGSISG KDLEPPSQRP KTSAKTAQRL IAHSMGLKLP ASGFGSKERD QEAARKNRIV SRQKQREDAW GDD
101: CDLASSRSSG NVENQSVASS GLKSDPNVSS FDADGKTEDS KVSSSNSAAH DSSDDDWEAL ADVEPSKLLP VEELPEISKL SVEEPKVQGP KRRGRGTFTY
201: KSDAMYSDRD FSESRFDDDS EDNDLSRESE KTDESLKSKY GTRHVLVLAG FSPSLRTTEL EKLFKDFKDS GFIIRWVNDT TALAVFKTPS AALEACKHVQ
301: CSFTIRVLDD NDSLLGSISG KDLEPPSQRP KTSAKTAQRL IAHSMGLKLP ASGFGSKERD QEAARKNRIV SRQKQREDAW GDD
Arabidopsis Description
At5g22100 [Source:UniProtKB/TrEMBL;Acc:Q9C576]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.