CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
mitochondrion 1
extracellular 5
nucleus 1
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0965600-01	Rice	nucleus	46.15	15.97
VIT_06s0004g07340.t01	Wine grape	nucleus	48.35	15.88
KRG88868	Soybean	nucleus	63.74	15.85
KRH25322	Soybean	cytosol, nucleus, plastid	60.44	15.41
VIT_06s0009g00340.t01	Wine grape	nucleus	51.65	13.86
Solyc06g074130.2.1	Tomato	nucleus	50.55	13.29
CDX70985	Canola	nucleus	51.65	13.2
PGSC0003DMT400015182	Potato	nucleus	50.55	12.99
CDX88809	Canola	nucleus	50.55	12.67
Bra006612.1-P	Field mustard	nucleus	50.55	12.64
GSMUA_Achr10P...	Banana	cytosol	52.75	12.53
Bra002391.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	23.08	12.43
EES19096	Sorghum	nucleus	49.45	12.4
AT5G22120.1	Thale cress	nucleus	51.65	12.27
KXG34199	Sorghum	nucleus	48.35	12.02
Zm00001d037530_P002	Maize	nucleus	47.25	11.85
TraesCS3A01G513800.1	Wheat	nucleus	45.05	11.05
TraesCS3B01G582500.1	Wheat	cytosol, mitochondrion, nucleus	45.05	11.02
TraesCS3D01G521500.1	Wheat	nucleus	42.86	10.54
HORVU3Hr1G112760.2	Barley	cytosol, nucleus	43.96	10.23
Bra002390.1-P	Field mustard	mitochondrion	5.49	6.76
Bra006611.1-P	Field mustard	cytosol	6.59	4.48

Protein Annotations

EMBL:ACUP02012255	EnsemblPlants:KRG89675	EnsemblPlantsGene:GLYMA_20G039700	Gene3D:3.30.70.330	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0035145	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	PANTHER:PTHR21678
PANTHER:PTHR21678:SF0	ProteinID:KRG89675	ProteinID:KRG89675.1	SEG:seg	UniParc:UPI000296887C	UniProt:K7N1E4
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:6708358..6709031

Molecular Weight (calculated)

10328.5 Da

IEP (calculated)

8.717

GRAVY (calculated)

0.114

Length

91 amino acids

Sequence
(BLAST)

1: MNINVKGEWI LMHIMSCPNF LSLSSYYSIT SSNYGTSHVL VLADFSPSTR TTKLEKLFEN FKDCGFVIRW VNDTIALAVF RTPPVGNYKV T

Best Arabidopsis Sequence Match ( AT5G22120.1 )
(BLAST)

001: MENTRPNEEE GRISEPNWSE RVEDLVVAGD VTAAISFLES LETNLQSRLG SSSSGERTEF GLQLSAALTQ LADLYSSEGL SLKSDELRTR SSLIKQRALD
101: CDLASSRSSG NVENQSVASS GLKSDPNVSS FDADGKTEDS KVSSSNSAAH DSSDDDWEAL ADVEPSKLLP VEELPEISKL SVEEPKVQGP KRRGRGTFTY
201: KSDAMYSDRD FSESRFDDDS EDNDLSRESE KTDESLKSKY GTRHVLVLAG FSPSLRTTEL EKLFKDFKDS GFIIRWVNDT TALAVFKTPS AALEACKHVQ
301: CSFTIRVLDD NDSLLGSISG KDLEPPSQRP KTSAKTAQRL IAHSMGLKLP ASGFGSKERD QEAARKNRIV SRQKQREDAW GDD

Arabidopsis Description

At5g22100 [Source:UniProtKB/TrEMBL;Acc:Q9C576]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.