Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19096 | Sorghum | nucleus | 83.88 | 84.57 |
| Os01t0965600-01 | Rice | nucleus | 53.28 | 74.14 |
| TraesCS3A01G513800.1 | Wheat | nucleus | 69.4 | 68.46 |
| TraesCS3D01G521500.1 | Wheat | nucleus | 68.85 | 68.11 |
| TraesCS3B01G582500.1 | Wheat | cytosol, mitochondrion, nucleus | 68.58 | 67.47 |
| HORVU3Hr1G112760.2 | Barley | cytosol, nucleus | 68.58 | 64.19 |
| Bra002390.1-P | Field mustard | mitochondrion | 11.2 | 55.41 |
| KRG89675 | Soybean | extracellular | 12.02 | 48.35 |
| GSMUA_Achr10P... | Banana | cytosol | 48.63 | 46.48 |
| Solyc06g074130.2.1 | Tomato | nucleus | 42.08 | 44.51 |
| Bra002391.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 20.49 | 44.38 |
| CDX70985 | Canola | nucleus | 41.8 | 42.98 |
| KRH25322 | Soybean | cytosol, nucleus, plastid | 41.8 | 42.86 |
| CDX88809 | Canola | nucleus | 42.35 | 42.7 |
| PGSC0003DMT400015182 | Potato | nucleus | 41.26 | 42.66 |
| KRG88868 | Soybean | nucleus | 42.35 | 42.35 |
| Bra006612.1-P | Field mustard | nucleus | 41.8 | 42.03 |
| VIT_06s0004g07340.t01 | Wine grape | nucleus | 31.15 | 41.16 |
| AT5G22120.1 | Thale cress | nucleus | 40.98 | 39.16 |
| VIT_06s0009g00340.t01 | Wine grape | nucleus | 33.33 | 35.99 |
| Bra006611.1-P | Field mustard | cytosol | 12.02 | 32.84 |
Protein Annotations
| EnsemblPlants:KXG34199 | EnsemblPlantsGene:SORBI_3003G439800 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | ncoils:Coil | PANTHER:PTHR21678 | PANTHER:PTHR21678:SF0 |
| ProteinID:KXG34199 | ProteinID:KXG34199.1 | SEG:seg | SUPFAM:SSF54928 | UniParc:UPI0001C80BBC | UniProt:A0A1B6Q8E7 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:73925970..73928651
Molecular Weight (calculated)
39631.6 Da
IEP (calculated)
4.782
GRAVY (calculated)
-0.717
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGPRWTEEV DDLVDAGDVD GAIALLESVV SNLSTSAAAA PPAADLRLAT ALGDLAGLHA SRGNTLRADE LRARAIVLRS RAAAPGALGD KEPSEKCSSQ
101: ESLMGLKDSE GSANTDDKNN EDEEDDWESI ADCGALDDTL ARSLEQEARV PSCSSSERSG TPSSGPKRRG RGSFLYNKSV LYSDQCGSER DLDDKESSPQ
201: GRSGSKGHVN ERENSAVTAA AQFGTRHVLV LYDFSPSTHT TDLERIFEKF GDHEVAIRWV NDTSALAVFR TPSAAIEAQA CIPPRYKVRS LKGDDDLLAK
301: IDGRDLEPPK PRPKTSARTA QRLIAHGMGL KQFTNFGTDE LKKQEEERKN RIAARQSMRD EAWGSD
101: ESLMGLKDSE GSANTDDKNN EDEEDDWESI ADCGALDDTL ARSLEQEARV PSCSSSERSG TPSSGPKRRG RGSFLYNKSV LYSDQCGSER DLDDKESSPQ
201: GRSGSKGHVN ERENSAVTAA AQFGTRHVLV LYDFSPSTHT TDLERIFEKF GDHEVAIRWV NDTSALAVFR TPSAAIEAQA CIPPRYKVRS LKGDDDLLAK
301: IDGRDLEPPK PRPKTSARTA QRLIAHGMGL KQFTNFGTDE LKKQEEERKN RIAARQSMRD EAWGSD
001: MENTRPNEEE GRISEPNWSE RVEDLVVAGD VTAAISFLES LETNLQSRLG SSSSGERTEF GLQLSAALTQ LADLYSSEGL SLKSDELRTR SSLIKQRALD
101: CDLASSRSSG NVENQSVASS GLKSDPNVSS FDADGKTEDS KVSSSNSAAH DSSDDDWEAL ADVEPSKLLP VEELPEISKL SVEEPKVQGP KRRGRGTFTY
201: KSDAMYSDRD FSESRFDDDS EDNDLSRESE KTDESLKSKY GTRHVLVLAG FSPSLRTTEL EKLFKDFKDS GFIIRWVNDT TALAVFKTPS AALEACKHVQ
301: CSFTIRVLDD NDSLLGSISG KDLEPPSQRP KTSAKTAQRL IAHSMGLKLP ASGFGSKERD QEAARKNRIV SRQKQREDAW GDD
101: CDLASSRSSG NVENQSVASS GLKSDPNVSS FDADGKTEDS KVSSSNSAAH DSSDDDWEAL ADVEPSKLLP VEELPEISKL SVEEPKVQGP KRRGRGTFTY
201: KSDAMYSDRD FSESRFDDDS EDNDLSRESE KTDESLKSKY GTRHVLVLAG FSPSLRTTEL EKLFKDFKDS GFIIRWVNDT TALAVFKTPS AALEACKHVQ
301: CSFTIRVLDD NDSLLGSISG KDLEPPSQRP KTSAKTAQRL IAHSMGLKLP ASGFGSKERD QEAARKNRIV SRQKQREDAW GDD
Arabidopsis Description
At5g22100 [Source:UniProtKB/TrEMBL;Acc:Q9C576]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.