Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77493 | Canola | cytosol | 100.0 | 100.0 |
| CDX85117 | Canola | nucleus | 98.73 | 98.73 |
| Bra028325.1-P | Field mustard | nucleus | 92.7 | 92.41 |
| AT3G23620.1 | Thale cress | cytosol | 81.59 | 81.85 |
| KRH32652 | Soybean | nucleus | 72.06 | 72.29 |
| KRH20030 | Soybean | nucleus | 70.79 | 71.02 |
| VIT_08s0007g03890.t01 | Wine grape | nucleus | 70.79 | 70.79 |
| PGSC0003DMT400072406 | Potato | cytosol | 68.25 | 67.82 |
| Os01t0513800-01 | Rice | nucleus | 64.44 | 65.48 |
| EES19780 | Sorghum | mitochondrion | 63.49 | 64.52 |
| Zm00001d018141_P001 | Maize | mitochondrion | 62.86 | 64.08 |
| Solyc10g083600.1.1 | Tomato | nucleus | 68.25 | 63.8 |
| Zm00001d038646_P002 | Maize | mitochondrion | 62.54 | 63.75 |
| TraesCS5B01G208800.1 | Wheat | mitochondrion | 61.27 | 62.06 |
| TraesCS5A01G215000.1 | Wheat | nucleus | 61.59 | 61.98 |
| TraesCS5D01G217000.1 | Wheat | mitochondrion | 61.59 | 61.98 |
| TraesCS5D01G426000.1 | Wheat | mitochondrion | 61.59 | 61.59 |
| Os05t0506900-01 | Rice | nucleus | 21.59 | 61.26 |
| HORVU5Hr1G061870.1 | Barley | nucleus | 60.95 | 61.15 |
| GSMUA_Achr11P... | Banana | mitochondrion | 64.76 | 60.35 |
| GSMUA_Achr5P20210_001 | Banana | nucleus | 65.08 | 52.97 |
| TraesCS2D01G079000.1 | Wheat | nucleus | 8.89 | 42.42 |
| TraesCS2A01G080900.1 | Wheat | nucleus | 8.57 | 40.91 |
| TraesCS2D01G059200.1 | Wheat | cytosol | 7.62 | 36.36 |
| HORVU2Hr1G013300.6 | Barley | cytosol | 11.43 | 30.25 |
Protein Annotations
Description
AT3G23620 (E=5e-129) | brix domain-containing protein
Coordinates
chrA07:-:4801144..4802596
Molecular Weight (calculated)
35671.6 Da
IEP (calculated)
10.362
GRAVY (calculated)
-0.606
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEIRTPKTH KAKRVLEKRA PKLVENGKKT LILHGTKTSA TVSSVLMELY RLKKGGAIKY SRRNENIRPF ESGGETSLEF FSLKTDCSIF VYGSHTKKRP
101: DNLVLGRMYD HHVYDLIEVG IENFKSLLSF SYDKKIAPHE GSKPFICFTG EGFENVPELK QLKEVLTDLF RGEVVENLNL TGLDRAYICT AVSPTKVFLT
201: HCAIKLKKSG TIVPRIELVE VGPSMDLVIR RNRLPNEGLR KEAMKSSKDK PKKKVKNVDQ DDVLGKLGRV YIPEQEVGKI PLPDKSKGVK RERREGKVKK
301: NKEEGSASKK LKESE
101: DNLVLGRMYD HHVYDLIEVG IENFKSLLSF SYDKKIAPHE GSKPFICFTG EGFENVPELK QLKEVLTDLF RGEVVENLNL TGLDRAYICT AVSPTKVFLT
201: HCAIKLKKSG TIVPRIELVE VGPSMDLVIR RNRLPNEGLR KEAMKSSKDK PKKKVKNVDQ DDVLGKLGRV YIPEQEVGKI PLPDKSKGVK RERREGKVKK
301: NKEEGSASKK LKESE
001: MMEIRTPKTG KAKRVLESRA PKLVETGKKT LILHGTKTSA TLSSVMTELY RLKKGGAIRY SRRNENIRPF ESGGETSLEF FSQKTDCSIF VYGSHTKKRP
101: DNLVLGRMYD HQVYDLIEVG IENFKSLRAF SYDKKFAPHE GTKPFICFIG EGFENVSELK HLKEVLTDLF RGEVVDNLNL TGLDRAYVCS AISPTKVFLT
201: HCALKLKKSG SIVPRMELVE VGPSMDLVIR RNRLPNDSLM KEAMRTSKDK PKKKEKNVDQ DAVLGKTGKI YMPDQKLKEM KLFDKSKGSK RERKDAKLKH
301: KEETVAKKMK VSSE
101: DNLVLGRMYD HQVYDLIEVG IENFKSLRAF SYDKKFAPHE GTKPFICFIG EGFENVSELK HLKEVLTDLF RGEVVDNLNL TGLDRAYVCS AISPTKVFLT
201: HCALKLKKSG SIVPRMELVE VGPSMDLVIR RNRLPNDSLM KEAMRTSKDK PKKKEKNVDQ DAVLGKTGKI YMPDQKLKEM KLFDKSKGSK RERKDAKLKH
301: KEETVAKKMK VSSE
Arabidopsis Description
Ribosome production factor 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LUG5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.