CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018141_P001	Maize	mitochondrion	94.84	95.15
Zm00001d038646_P002	Maize	mitochondrion	94.52	94.82
Os01t0513800-01	Rice	nucleus	90.97	90.97
TraesCS5D01G217000.1	Wheat	mitochondrion	82.58	81.79
TraesCS5A01G215000.1	Wheat	nucleus	82.58	81.79
TraesCS5D01G426000.1	Wheat	mitochondrion	82.9	81.59
TraesCS5B01G208800.1	Wheat	mitochondrion	81.61	81.35
HORVU5Hr1G061870.1	Barley	nucleus	81.94	80.89
Os05t0506900-01	Rice	nucleus	26.45	73.87
PGSC0003DMT400072406	Potato	cytosol	73.23	71.61
VIT_08s0007g03890.t01	Wine grape	nucleus	70.65	69.52
GSMUA_Achr11P...	Banana	mitochondrion	74.19	68.05
KRH32652	Soybean	nucleus	68.39	67.52
KRH20030	Soybean	nucleus	68.39	67.52
Solyc10g083600.1.1	Tomato	nucleus	73.23	67.36
TraesCS2D01G079000.1	Wheat	nucleus	13.87	65.15
CDX77493	Canola	cytosol	64.52	63.49
Bra014967.1-P	Field mustard	cytosol	64.52	63.49
CDX85117	Canola	nucleus	64.19	63.17
AT3G23620.1	Thale cress	cytosol	63.23	62.42
CDY18105	Canola	nucleus	62.26	61.08
CDY50460	Canola	nucleus	61.94	60.76
Bra028325.1-P	Field mustard	nucleus	61.94	60.76
GSMUA_Achr5P20210_001	Banana	nucleus	74.19	59.43
TraesCS2A01G080900.1	Wheat	nucleus	12.58	59.09
CDX95401	Canola	cytosol	19.03	51.75
TraesCS2D01G059200.1	Wheat	cytosol	10.32	48.48
CDY33857	Canola	cytosol, mitochondrion, nucleus	16.77	42.62
HORVU2Hr1G013300.6	Barley	cytosol	15.48	40.34

Protein Annotations

MapMan:17.1.2.2.1.11.1	EntrezGene:8080081	InterPro:Brix	UniProt:C5Z0R9	ncoils:Coil	EnsemblPlants:EES19780
ProteinID:EES19780	ProteinID:EES19780.1	GO:GO:0000027	GO:GO:0000463	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0019843	InterPro:IPR007109	PFAM:PF04427	PFscan:PS50833	PANTHER:PTHR12728	SMART:SM00879
EnsemblPlantsGene:SORBI_3009G190300	unigene:Sbi.5888	UniParc:UPI0001A88FF6	RefSeq:XP_002441350.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:54239165..54242408

Molecular Weight (calculated)

35231.0 Da

IEP (calculated)

10.283

GRAVY (calculated)

-0.538

Length

310 amino acids

Sequence
(BLAST)

001: MVAAIRVPKT QRARRELLKH APKLVETSKK TLILHGTKTS AVLNSVLSDI YHLKRDNAVK YTKKNDNIRP FESGGESSLE FFSLKTDCSL IVYGSHSKKR
101: PNNLILGRTY DHHIYDLVEV GVENYKSMES YVYDKKLAPK LGSKPFFAFI GEHFESAEEL KHLKEVLLDL FKGEVVENLN LAGVDRIYVC TAISPTTVYI
201: MHCALRLKRS GTSIPRMELV EVGPSMDLVV RRHRLPVESL KKEAMKTAEH AKKMKNVTKD PVKGKLGKVY MPDQQVGKLT LSNDVKGLKR ERREAKKNNE
301: DSKKQKVNPE

Best Arabidopsis Sequence Match ( AT3G23620.1 )
(BLAST)

001: MMEIRTPKTG KAKRVLESRA PKLVETGKKT LILHGTKTSA TLSSVMTELY RLKKGGAIRY SRRNENIRPF ESGGETSLEF FSQKTDCSIF VYGSHTKKRP
101: DNLVLGRMYD HQVYDLIEVG IENFKSLRAF SYDKKFAPHE GTKPFICFIG EGFENVSELK HLKEVLTDLF RGEVVDNLNL TGLDRAYVCS AISPTKVFLT
201: HCALKLKKSG SIVPRMELVE VGPSMDLVIR RNRLPNDSLM KEAMRTSKDK PKKKEKNVDQ DAVLGKTGKI YMPDQKLKEM KLFDKSKGSK RERKDAKLKH
301: KEETVAKKMK VSSE

Arabidopsis Description

Ribosome production factor 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LUG5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.