Factsheet for Bra026381.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89281	Canola	cytosol	97.03	97.03
KRH37954	Soybean	cytosol	66.34	43.51
PGSC0003DMT400037303	Potato	cytosol	73.27	18.05
GSMUA_Achr4P07140_001	Banana	mitochondrion	73.27	17.17
Bra002954.1-P	Field mustard	plastid	74.26	16.13
Bra019075.1-P	Field mustard	plastid	75.25	16.1
Solyc07g064280.2.1	Tomato	plastid	72.28	16.01
PGSC0003DMT400002722	Potato	plastid	72.28	16.01
Solyc10g006400.2.1	Tomato	plastid	72.28	15.6
VIT_19s0177g00310.t01	Wine grape	plastid	70.3	15.5
KRG98855	Soybean	mitochondrion, plastid	72.28	15.5
KRH46102	Soybean	nucleus, plastid	72.28	15.24
Bra037230.1-P	Field mustard	plastid	54.46	12.47
Bra016829.1-P	Field mustard	plastid	54.46	11.85
Bra016830.1-P	Field mustard	plastid	39.6	8.85
Bra025430.1-P	Field mustard	plastid	24.75	5.06
Bra028413.1-P	Field mustard	plastid	24.75	5.0
Bra028191.1-P	Field mustard	plastid	23.76	4.8

Protein Annotations

KEGG:00260+4.2.1.20	KEGG:00400+4.2.1.20	Gene3D:3.40.50.1100	MapMan:35.1	EnsemblPlantsGene:Bra026381	EnsemblPlants:Bra026381.1
EnsemblPlants:Bra026381.1-P	GO:GO:0000162	GO:GO:0003674	GO:GO:0003824	GO:GO:0004834	GO:GO:0006568
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	UniProt:M4EC72	PANTHER:PTHR42882
PANTHER:PTHR42882:SF3	SUPFAM:SSF53686	InterPro:Trp_synth_beta	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0002545761	:

Description

AT4G27070 (E=2e-037) TSB2 | TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2); tryptophan synthase

Coordinates

chrA01:+:9638506..9638978

Molecular Weight (calculated)

11362.5 Da

IEP (calculated)

4.677

GRAVY (calculated)

-0.397

Length

101 amino acids

Sequence
(BLAST)

001: MSYLLQDDDG QITEPRSSIS AGLDYPGVGP EHGFLKDVGR AEYYSVIDGE ALEAFKRVSR LEGIIPVLET SRALAHLEKL CPTLPLTRWN QRGLEFQWER
101: G

Best Arabidopsis Sequence Match ( AT4G27070.1 )
(BLAST)

001: MATASTAATF RPSSVSASSE LTHLRSPSKL PKFTPLPSAR SRSSSSFSVS CTIAKDPAVV MADSEKIKAA GSDPTMWQRP DSFGRFGKFG GKYVPETLMH
101: ALSELETAFY SLATDEDFQR ELAEILKDYV GRESPLYFAE RLTEHYRREN GEGPLIYLKR EDLNHTGAHK INNAVAQALL AKRLGKKRII AETGAGQHGV
201: ATATVCARFG LQCIIYMGAQ DMERQALNVF RMRLLGAEVR GVHSGTATLK DATSEAIRDW VTNVETTHYI LGSVAGPHPY PMMVRDFHAV IGKETRKQAM
301: EKWGGKPDVL VACVGGGSNA MGLFHEFVDD TEVRMIGVEA AGFGLDSGKH AATLTKGDVG VLHGAMSYLL QDDDGQIIEP HSISAGLDYP GVGPEHSFLK
401: DVGRAEYFSV TDEEALEAFK RVSRLEGIIP ALETSHALAH LEKLCPTLPD GARVVLNFSG RGDKDVQTAI KYLEV

Arabidopsis Description

TSB2Tryptophan synthase [Source:UniProtKB/TrEMBL;Acc:Q0WS13]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.