Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75158 | Canola | cytosol | 52.63 | 1.5 |
| CDY41384 | Canola | nucleus | 36.84 | 0.93 |
| CDX83142 | Canola | cytosol | 47.37 | 0.86 |
| CDY34005 | Canola | cytosol | 47.37 | 0.86 |
| CDX70245 | Canola | nucleus | 36.84 | 0.62 |
| CDY61565 | Canola | nucleus | 31.58 | 0.61 |
| GSMUA_Achr3P08080_001 | Banana | cytosol | 31.58 | 0.6 |
| CDX84655 | Canola | nucleus | 31.58 | 0.59 |
| Zm00001d037142_P001 | Maize | cytosol | 31.58 | 0.58 |
| EER88041 | Sorghum | nucleus | 31.58 | 0.57 |
| TraesCS7A01G168300.1 | Wheat | nucleus | 31.58 | 0.57 |
| TraesCS7B01G073100.1 | Wheat | cytosol | 31.58 | 0.57 |
| TraesCS7D01G169200.1 | Wheat | cytosol | 31.58 | 0.57 |
| HORVU7Hr1G035280.12 | Barley | cytosol | 31.58 | 0.57 |
| Zm00001d044971_P005 | Maize | cytosol, nucleus, plastid | 31.58 | 0.56 |
| CDY36201 | Canola | cytosol | 5.26 | 0.46 |
| CDY36202 | Canola | cytosol, extracellular | 0.0 | 0.0 |
| Os06t0208300-01 | Rice | cytosol | 0.0 | 0.0 |
| CDX75160 | Canola | cytosol | 0.0 | 0.0 |
| Zm00001d047048_P001 | Maize | cytosol, mitochondrion, peroxisome | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY36200 | EnsemblPlantsGene:GSBRNA2T00060094001 | ProteinID:CDY36200 | ProteinID:CDY36200.1 | UniParc:UPI0004EE4EA8 | UniProt:A0A078HCR1 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaAnng04460DBnaAnng04460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCR1]
Coordinates
chrLK032369:+:199580..199639
Molecular Weight (calculated)
2181.8 Da
IEP (calculated)
10.256
GRAVY (calculated)
0.316
Length
19 amino acids
Sequence
(BLAST)
(BLAST)
1: MYKAVSLKSI IAQNCRGWI
001: MSQYSDDDYS HEDDSEMEDE DEEDEYEPRS SRKGRSGKKR GRSNSDSDGR RGSKKKSSGS AFIDWEVEVD DDVEDDDDDV DVEDGFIVSG EADLPNEDSD
101: HRRQYYQRGF HPHEEDVDEL EKRTLERLST KYAKDDYELD DVNDVDQQAL LPSVRDPKLW LVKCAIGRER EVAVCLMQKI VDRGSEFKIR SAIALDHLQN
201: YVYIEADMEA HVKEAIKGMR NIYANQKILL VPIKEMTAVL SVESKAIDLS RDSWVRMKLG IYKGDLAQVV DVDNVRKRVT VKLIPRIDLQ ALANKLEGTE
301: NVKKKAFAPP PRFMNIDEAR ELHIRVEHRR DPMTGDYFEN IGGMLFKDGF LYKKVSTKSI AAQNVTPTFD ELERFKRPNE NGEIDFVDES TLFANRKKGH
401: FMKGDAVIVI KGDLKNLKGW IEKVDEENVL IRSEMKDLPN PIAVNGRELC KYFEPGNFVK VVSGIHEGGT GMIVKVDQHM LIILSDTTKE HICVFADHVA
501: KSAEVTKGVT KIGDYELHDL VILSDFSFGV ILKLDSEAIQ ILKGVPDSSE VSIVKASEIK YKIWKKINVQ DRYKNVVAVK DVVRVIEGPS KGKQGPVVQI
601: YKGVLFIHDR HNLEHTGFIC TRCSSCVLAG GNFKTPALVP PSPRRFQRAD MGYNPGAGGR HQGGRGRRGD DHLVGTYVKI RLGPFKGYSG RLVEVKDKLV
701: RVELEAKIVT VERKAISDMT DNVVATPQYN MGSQTPMHPS RTPLHPCMTP MRHSGATPIH DGMRTPMRGR AWNPYMPMSP PRDNWEDGNP GSWGTSPYEA
801: ATPGSDWGSS TPGRSSYRDA GTPINNANAP SPMTPSSTSY LPTTPGGQAM TPGTDLDVMS LDIGGDAETR FIPGILVNVH KAGEDRNPGV IRDVLPDGSC
901: VVALGHRGEG ETIRATQNKV SLVCPKKNER VKILGGKYCG STAKVIGEDG QDGIVKLDES LDIKILKLTI LAKLVHE
101: HRRQYYQRGF HPHEEDVDEL EKRTLERLST KYAKDDYELD DVNDVDQQAL LPSVRDPKLW LVKCAIGRER EVAVCLMQKI VDRGSEFKIR SAIALDHLQN
201: YVYIEADMEA HVKEAIKGMR NIYANQKILL VPIKEMTAVL SVESKAIDLS RDSWVRMKLG IYKGDLAQVV DVDNVRKRVT VKLIPRIDLQ ALANKLEGTE
301: NVKKKAFAPP PRFMNIDEAR ELHIRVEHRR DPMTGDYFEN IGGMLFKDGF LYKKVSTKSI AAQNVTPTFD ELERFKRPNE NGEIDFVDES TLFANRKKGH
401: FMKGDAVIVI KGDLKNLKGW IEKVDEENVL IRSEMKDLPN PIAVNGRELC KYFEPGNFVK VVSGIHEGGT GMIVKVDQHM LIILSDTTKE HICVFADHVA
501: KSAEVTKGVT KIGDYELHDL VILSDFSFGV ILKLDSEAIQ ILKGVPDSSE VSIVKASEIK YKIWKKINVQ DRYKNVVAVK DVVRVIEGPS KGKQGPVVQI
601: YKGVLFIHDR HNLEHTGFIC TRCSSCVLAG GNFKTPALVP PSPRRFQRAD MGYNPGAGGR HQGGRGRRGD DHLVGTYVKI RLGPFKGYSG RLVEVKDKLV
701: RVELEAKIVT VERKAISDMT DNVVATPQYN MGSQTPMHPS RTPLHPCMTP MRHSGATPIH DGMRTPMRGR AWNPYMPMSP PRDNWEDGNP GSWGTSPYEA
801: ATPGSDWGSS TPGRSSYRDA GTPINNANAP SPMTPSSTSY LPTTPGGQAM TPGTDLDVMS LDIGGDAETR FIPGILVNVH KAGEDRNPGV IRDVLPDGSC
901: VVALGHRGEG ETIRATQNKV SLVCPKKNER VKILGGKYCG STAKVIGEDG QDGIVKLDES LDIKILKLTI LAKLVHE
Arabidopsis Description
Putative transcription elongation factor SPT5 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:O80770]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.