Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49708 | Canola | plastid | 78.92 | 68.51 |
| CDX92700 | Canola | plastid | 76.96 | 67.67 |
| AT4G25370.1 | Thale cress | plastid | 71.08 | 60.92 |
| GSMUA_Achr11P... | Banana | cytosol | 28.43 | 41.73 |
| VIT_16s0022g01840.t01 | Wine grape | plastid | 44.12 | 39.47 |
| KRH38717 | Soybean | nucleus, plastid | 48.53 | 39.29 |
| KRH09224 | Soybean | nucleus, plastid | 49.02 | 38.46 |
| GSMUA_Achr5P18820_001 | Banana | plastid | 41.18 | 37.33 |
| KRH38715 | Soybean | plastid | 35.78 | 37.24 |
| KRH09223 | Soybean | plastid | 45.1 | 36.51 |
| Solyc03g007110.2.1 | Tomato | plastid | 39.71 | 34.47 |
| CDX94453 | Canola | plastid | 20.59 | 32.31 |
| CDX94486 | Canola | plastid | 37.75 | 31.56 |
| OQU92918 | Sorghum | plastid | 35.29 | 31.3 |
| CDX86723 | Canola | plastid | 37.25 | 31.15 |
| Os03t0247000-01 | Rice | plastid | 34.8 | 30.6 |
| TraesCS4D01G225100.1 | Wheat | plastid | 32.35 | 28.82 |
| TraesCS4A01G079500.1 | Wheat | plastid | 31.86 | 28.38 |
| TraesCS4B01G224500.1 | Wheat | plastid | 31.86 | 28.38 |
| Zm00001d028414_P002 | Maize | plastid | 32.84 | 27.35 |
| HORVU4Hr1G063150.3 | Barley | plastid | 32.35 | 26.19 |
| Zm00001d047920_P003 | Maize | plastid | 34.8 | 24.65 |
Protein Annotations
| EnsemblPlants:CDY57285 | EnsemblPlantsGene:GSBRNA2T00020759001 | Gene3D:1.10.1780.10 | GO:A0A078J4A7 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0019538 | InterPro:Clp_N | InterPro:Clp_N_dom_sf | InterPro:IPR036628 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF124 |
| PFAM:PF02861 | ProteinID:CDY57285 | ProteinID:CDY57285.1 | SEG:seg | UniParc:UPI0004EE5FF8 | UniProt:A0A078J4A7 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC06g41220DBnaC06g41220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4A7]
Coordinates
chrLK033561:+:27613..29227
Molecular Weight (calculated)
22484.3 Da
IEP (calculated)
10.643
GRAVY (calculated)
-0.160
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSYTLSFI PLTTVVVPRR STSSPSFSLI PPPSLLGKKL LVTQPSRRCF VSKHRFLTSA STVFSVPTAQ PENGSSSDKI PKWSARAIKS LAMGELEARK
101: LKYPTTGTET HGYFSRRYKA QLLSSFLRGN GVTLFKVREE IIKLLGKSDM CGWTAYLLLG VWSQKDSAGR QILEALGFNE DKAKQVACLS LVSDVDLSFK
201: KQGQ
101: LKYPTTGTET HGYFSRRYKA QLLSSFLRGN GVTLFKVREE IIKLLGKSDM CGWTAYLLLG VWSQKDSAGR QILEALGFNE DKAKQVACLS LVSDVDLSFK
201: KQGQ
001: MASYTVSFIP LTLSNPRIFV SRQNGSPSSS SRIPLTSSLL GKKLLATQPS HRCFVPKLRC LTSASTVLNV PIAQPENGSS DKIPKWSARA IKSLAMGELE
101: ARKLKYPSTG TEAILMGILV EGTSTVAKFL RGNGVTLFKV RDETLSLLGK SDMYFFSPEH PPLTEPAQKA IAWAIDEKNK SDVDGELTTA YLLLGVWSQK
201: DSAGRQILEK LGFNEDKAKE VEKSMNEDVD LSFKKQGQ
101: ARKLKYPSTG TEAILMGILV EGTSTVAKFL RGNGVTLFKV RDETLSLLGK SDMYFFSPEH PPLTEPAQKA IAWAIDEKNK SDVDGELTTA YLLLGVWSQK
201: DSAGRQILEK LGFNEDKAKE VEKSMNEDVD LSFKKQGQ
Arabidopsis Description
CLPT1ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93WL3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.