Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- cytosol 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09224 | Soybean | nucleus, plastid | 92.06 | 89.23 |
| KRH38715 | Soybean | plastid | 60.32 | 77.55 |
| GSMUA_Achr11P... | Banana | cytosol | 42.06 | 76.26 |
| KRH38717 | Soybean | nucleus, plastid | 75.79 | 75.79 |
| VIT_16s0022g01840.t01 | Wine grape | plastid | 54.76 | 60.53 |
| GSMUA_Achr5P18820_001 | Banana | plastid | 50.4 | 56.44 |
| Solyc03g007110.2.1 | Tomato | plastid | 51.59 | 55.32 |
| Bra019170.1-P | Field mustard | plastid | 50.4 | 54.04 |
| CDY49708 | Canola | plastid | 50.4 | 54.04 |
| CDX92700 | Canola | plastid | 48.81 | 53.02 |
| AT4G25370.1 | Thale cress | plastid | 47.62 | 50.42 |
| Os03t0247000-01 | Rice | plastid | 46.03 | 50.0 |
| OQU92918 | Sorghum | plastid | 43.65 | 47.83 |
| KRH77428 | Soybean | endoplasmic reticulum, golgi | 47.62 | 47.06 |
| CDX94453 | Canola | plastid | 24.21 | 46.92 |
| TraesCS4B01G224500.1 | Wheat | plastid | 42.46 | 46.72 |
| TraesCS4D01G225100.1 | Wheat | plastid | 42.46 | 46.72 |
| TraesCS4A01G079500.1 | Wheat | plastid | 42.06 | 46.29 |
| CDY57285 | Canola | plastid | 36.51 | 45.1 |
| Zm00001d028414_P002 | Maize | plastid | 43.65 | 44.9 |
| HORVU4Hr1G063150.3 | Barley | plastid | 42.46 | 42.46 |
| Zm00001d047920_P003 | Maize | plastid | 44.05 | 38.54 |
Protein Annotations
| EMBL:ACUP02010275 | EMBL:BT096732 | EnsemblPlants:KRH09223 | EnsemblPlantsGene:GLYMA_16G204000 | EntrezGene:100786069 | Gene3D:1.10.1780.10 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0019538 | InterPro:Clp_N | InterPro:Clp_N_dom_sf | InterPro:IPR036628 |
| PANTHER:PTHR11638 | PANTHER:PTHR11638:SF124 | PFAM:PF02861 | ProteinID:KRH09223 | ProteinID:KRH09223.1 | SUPFAM:SSF81923 |
| UniParc:UPI0001B16B69 | UniProt:C6TGI2 | MapMan:19.4.2.9.3 | : | : | : |
Description
hypothetical protein
Coordinates
chr16:-:36507514..36511554
Molecular Weight (calculated)
27075.5 Da
IEP (calculated)
9.112
GRAVY (calculated)
-0.244
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MKASTLPVYS TPLPKTSNFS LHLLPMASIP TLSSTLPTLS AHSLSHSNPN NHCTLPPTSL FGTRITLLRA TSSSHSLPNT NCRATSATVS FSLPTPKPLS
101: DTPEKTPKWS ERGIKSYAMG ELEARKLKYP NTGTEALLMG ILVEGTSNAA KFLRANGITL LKVREETVGL LGKSDLFFFS PEHPPLTEPA QKALDWAIEE
201: KLKSGEGGEI NATHLLLGIW SQKESAGQQI LATLGFNDEK AKELAKTIGG DV
101: DTPEKTPKWS ERGIKSYAMG ELEARKLKYP NTGTEALLMG ILVEGTSNAA KFLRANGITL LKVREETVGL LGKSDLFFFS PEHPPLTEPA QKALDWAIEE
201: KLKSGEGGEI NATHLLLGIW SQKESAGQQI LATLGFNDEK AKELAKTIGG DV
001: MASYTVSFIP LTLSNPRIFV SRQNGSPSSS SRIPLTSSLL GKKLLATQPS HRCFVPKLRC LTSASTVLNV PIAQPENGSS DKIPKWSARA IKSLAMGELE
101: ARKLKYPSTG TEAILMGILV EGTSTVAKFL RGNGVTLFKV RDETLSLLGK SDMYFFSPEH PPLTEPAQKA IAWAIDEKNK SDVDGELTTA YLLLGVWSQK
201: DSAGRQILEK LGFNEDKAKE VEKSMNEDVD LSFKKQGQ
101: ARKLKYPSTG TEAILMGILV EGTSTVAKFL RGNGVTLFKV RDETLSLLGK SDMYFFSPEH PPLTEPAQKA IAWAIDEKNK SDVDGELTTA YLLLGVWSQK
201: DSAGRQILEK LGFNEDKAKE VEKSMNEDVD LSFKKQGQ
Arabidopsis Description
CLPT1ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93WL3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.