Factsheet for GSMUA_Achr10P02620_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
cytosol 2
peroxisome 3
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0036g00840.t01	Wine grape	cytosol	9.66	89.61
PGSC0003DMT400049176	Potato	cytosol	27.03	64.12
Bra001106.1-P	Field mustard	plasma membrane	58.82	58.41
CDX74189	Canola	plasma membrane	58.82	58.33
CDY42929	Canola	plasma membrane	57.84	58.17
CDY49334	Canola	plasma membrane	57.7	57.78
Bra040191.1-P	Field mustard	plasma membrane	57.42	57.58
Solyc04g010080.2.1	Tomato	cytosol	58.68	57.48
CDX92070	Canola	plasma membrane	57.98	57.26
AT3G04480.1	Thale cress	plasma membrane	57.56	57.24
Os02t0810450-01	Rice	cytosol, nucleus, peroxisome	57.98	56.48
KRG94883	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	58.54	56.41
KXG31325	Sorghum	cytosol, nucleus, peroxisome	57.42	56.24
TraesCS6B01G415800.1	Wheat	peroxisome	57.14	55.97
TraesCS6D01G362600.1	Wheat	peroxisome	57.28	55.65
TraesCS6A01G378100.1	Wheat	peroxisome	57.14	55.51
PGSC0003DMT400029925	Potato	plasma membrane	58.68	55.35
HORVU6Hr1G088800.8	Barley	peroxisome	56.44	54.83
CDY20689	Canola	extracellular	11.76	51.85
Zm00001d018439_P003	Maize	cytosol	51.82	48.68

Protein Annotations

EnsemblPlants:GSMUA_Achr10P02620_001	EnsemblPlants:GSMUA_Achr10T02620_001	EnsemblPlantsGene:GSMUA_Achr10G02620_001	Gene3D:3.30.1330.40	Gene3D:3.40.50.620	Gene3D:3.90.1490.10
InterPro:DPH6/MJ0570	InterPro:Diphthami_syn_dom	InterPro:IPR014729	InterPro:IPR035959	InterPro:Rossmann-like_a/b/a_fold	InterPro:RutC-like_sf
InterPro:YjgF/YER057c/UK114	PANTHER:PTHR12196	PFAM:PF01042	PFAM:PF01902	SEG:seg	SUPFAM:SSF52402
SUPFAM:SSF55298	TIGRFAMs:TIGR00290	UniParc:UPI0002968C26	UniProt:M0RET9	MapMan:17.5.2.2.6	:

Description

Putative Meiotically up-regulated gene 71 protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G02620_001]

Coordinates

chr10:-:7604676..7623140

Molecular Weight (calculated)

78850.8 Da

IEP (calculated)

4.960

GRAVY (calculated)

0.193

Length

714 amino acids

Sequence
(BLAST)

001: MKVVALVSGG KDSCYAMMRC IDYGHEIVAL ANLMPLDDSV DELDSYMYQT VGHQIVVGYA ECMGLPLFRR RIRGSTRHQH LNYKMTSGDE VEDMFVLLNE
101: VKKQIPSITA VSSGAIASDY QRLRVESVCS RLGLVSLAYL WKQDQTLLLE EMIERGIIAI TIKVAAMGLN PAKHLGRELA DLIPYLLQIK ELCGINVCGE
201: GGEYETLTLD CPLFKNARIF LDKFEVILHS PDNIAPVGFL HPLAFHLQHK MEPLSSGSCD IGSGKVGYVC EVQGDSTPDH MVQSLSACSQ LGNCTTKNLN
301: LCISRGSRDK FSIGCWIQNV SKTLDGLQED LISVLGKIEL KLNEDGFDWL NVIYIHLYIS NMKDFTLANE VYVKFITEKK CFLGVPSRST IELPLVQVGL
401: GNAFVEVLVA NDHSKRVLHV QSISCWAPSC IGPYSQATLH GEVLHMAGQL GLDPPTMTLC SGGPAIEIEQ ALLNSEAIAN CFNSSLVSCA ILLTVYCAAS
501: LTFCERTEIQ HKMESFFDDD SDSIDVKRVA SPIFLYILAP ALPKGALVEV KPVLYIPENG DYGIGNNLLG SDSKEMVWDF QTYTISGKIC AALVSITKDV
601: AAKICPNTEP ELISGDHIRV IAKFCVFLVN KVLLDNYLFW GDLMHLKFYY TAYLSMTAET LNLIFYEVFA AFAEDSKSFE MGKEPIFSLI PVLSSGRSAS
701: MEDIITCELF ASKL

Best Arabidopsis Sequence Match ( AT3G04480.1 )
(BLAST)

001: MKVVALVSGG KDSCYAMMKC IQYGHEIVAL ANLLPVDDSV DELDSYMYQT VGHQILVGYA ECMNVPLFRR RIRGSSRHQK LSYQMTPDDE VEDMFVLLSE
101: VKRQIPSITA VSSGAIASDY QRLRVESICS RLGLVSLAFL WKQDQTLLLQ DMIANGIKAI LVKVAAIGLD PSKHLGKDLA FMEPYLLKLK EKYGSNVCGE
201: GGEYETLTLD CPLFTNASIV LDEYQVVLHS PDSIAPVGVL HPSTFHLEKK GNPDSHSPEE ESSLVSEVLG DGPNTSDSTR QRDNGIVDLV EHTSNRLHIS
301: RAEKHNTFSI CCWLEDSSES SKGLKEDLET VLTELESQLL KHGYNWQHVL YIHLYISDMS EFAVANETYV KFITQEKCPF GVPSRSTIEL PLVQAGLGKA
401: YIEVLVANDE SKRVLHVQSI SCWAPSCIGP YSQATLHQSV LHMAGQLGLD PPTMNLQTEG AIAELNQALT NSEAIAESFN CSISSSAILF VVFCSARTKQ
501: SERNQLHEKF VTFLGLAKSS RRVQNVLDPM FLYILVPDLP KRALVEVKPI LYVEEDTDTE DETSRDQSGE GHYSIWGYKP EKWHQDCVQK RVVDGKVCVA
601: VLSISAELMR KLQGEEEELE IVSRFCVYLL NKTLSENSFS WQDTTSLRIH FSTSIGVSVE RLSAIFVSAF RELNEMSDGV KMDSLKEPIF NLVPVLGAGN
701: SSASLDNIIT CELFALRS

Arabidopsis Description

Endoribonuclease [Source:UniProtKB/TrEMBL;Acc:F4J3Q1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.