Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31325 | Sorghum | cytosol, nucleus, peroxisome | 78.44 | 78.88 |
| TraesCS6B01G415800.1 | Wheat | peroxisome | 78.31 | 78.74 |
| TraesCS6D01G362600.1 | Wheat | peroxisome | 78.31 | 78.1 |
| HORVU6Hr1G088800.8 | Barley | peroxisome | 78.04 | 77.82 |
| TraesCS6A01G378100.1 | Wheat | peroxisome | 77.49 | 77.28 |
| Zm00001d018439_P003 | Maize | cytosol | 72.03 | 69.47 |
| PGSC0003DMT400049176 | Potato | cytosol | 25.51 | 62.13 |
| VIT_14s0036g00840.t01 | Wine grape | cytosol | 6.28 | 59.74 |
| GSMUA_Achr10P... | Banana | peroxisome | 56.48 | 57.98 |
| CDY49334 | Canola | plasma membrane | 53.07 | 54.56 |
| Bra001106.1-P | Field mustard | plasma membrane | 53.48 | 54.52 |
| CDX74189 | Canola | plasma membrane | 53.48 | 54.44 |
| CDX92070 | Canola | plasma membrane | 53.62 | 54.36 |
| Bra040191.1-P | Field mustard | plasma membrane | 52.66 | 54.21 |
| Solyc04g010080.2.1 | Tomato | cytosol | 53.89 | 54.18 |
| AT3G04480.1 | Thale cress | plasma membrane | 53.07 | 54.18 |
| CDY42929 | Canola | plasma membrane | 52.39 | 54.08 |
| PGSC0003DMT400029925 | Potato | plasma membrane | 53.89 | 52.18 |
| KRG94883 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 51.71 | 51.15 |
| CDY20689 | Canola | extracellular | 8.32 | 37.65 |
Protein Annotations
| MapMan:17.5.2.2.6 | Gene3D:3.30.1330.40 | Gene3D:3.40.50.620 | Gene3D:3.90.1490.10 | EntrezGene:9270287 | UniProt:B9F460 |
| ProteinID:BAS81512.1 | InterPro:DPH6/MJ0570 | InterPro:Diphthami_syn_dom | ProteinID:EEE58025.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR014729 | InterPro:IPR035959 | EnsemblPlantsGene:Os02g0810450 | EnsemblPlants:Os02t0810450-01 | PFAM:PF01042 | PFAM:PF01902 |
| PANTHER:PTHR12196 | InterPro:Rossmann-like_a/b/a_fold | InterPro:RutC-like_sf | SUPFAM:SSF52402 | SUPFAM:SSF55298 | TIGRFAMs:TIGR00290 |
| UniParc:UPI00019333EB | RefSeq:XP_015625282.1 | InterPro:YjgF/YER057c/UK114 | : | : | : |
Description
Similar to endoribonuclease. (Os02t0810450-01)
Coordinates
chr2:+:34649425..34653705
Molecular Weight (calculated)
79906.8 Da
IEP (calculated)
4.807
GRAVY (calculated)
0.111
Length
733 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVVALVSGG KDSCFAMMRC LDYGHKIVAL ANLIPEDDAV DELDSYMYQT VGHQIVVSYA KCMGLPLFRR RIRGSSREQG LKYNVTTGDE VEDMFALLSE
101: VKRQIPSITA VSSGAIASDY QRLRVESVCS RLGLVSLAYL WKQDQTLLLD EMIRRGIVAI IVKVAAMGLK PSAHLGKELA ELKCHLLQLN ESYGINVCGE
201: GGEYETLTLD CPLFRNARIV LDDFEVILHS PDSIAPVGIL HPLKFHLEHK PNSFGTVGDS AIAQENSSYL YEVDGAIAHS DVEKKQETLS PVTTVDACTN
301: IDLCISKTGK KLFSIGCWIQ DPCGTSEGLK TDLVAVLSRI ENQLKEEGLG WMNVLYVHLF ISSMKEFGLA NEVYVSFITE QKCPLGVPSR STVELPLVQV
401: GLGHAYVEVL VTKEQVKRVL HVQSISCWAP SCIGPYSQAT LHGEILYMAG QLGLDPPTMK LCPGGPTAEL EFALRNSEAV ANAFGCSIFS SAIHFLVYCS
501: AHLTSSEKEQ VEHTLRSSYI TSLDCSNTGS YPTILYVFAS DLPKGAYVEI KPILYVPSPT NDDGVPTREQ EAGGSLPASS EAFSAWSAQY SDLDDSCCQV
601: HTIGGKICSA VVSVTNDIAL KICSTTEQLY HSEEHLKALA RFCAFQLAKI LIDNGFSWDN LTMLRFYYSV EHPVTADVMS RVFSEAFAEL EEGGVGSCTP
701: DGVPIFNIVP VSASGCFTSL SDIISCELLA SKV
101: VKRQIPSITA VSSGAIASDY QRLRVESVCS RLGLVSLAYL WKQDQTLLLD EMIRRGIVAI IVKVAAMGLK PSAHLGKELA ELKCHLLQLN ESYGINVCGE
201: GGEYETLTLD CPLFRNARIV LDDFEVILHS PDSIAPVGIL HPLKFHLEHK PNSFGTVGDS AIAQENSSYL YEVDGAIAHS DVEKKQETLS PVTTVDACTN
301: IDLCISKTGK KLFSIGCWIQ DPCGTSEGLK TDLVAVLSRI ENQLKEEGLG WMNVLYVHLF ISSMKEFGLA NEVYVSFITE QKCPLGVPSR STVELPLVQV
401: GLGHAYVEVL VTKEQVKRVL HVQSISCWAP SCIGPYSQAT LHGEILYMAG QLGLDPPTMK LCPGGPTAEL EFALRNSEAV ANAFGCSIFS SAIHFLVYCS
501: AHLTSSEKEQ VEHTLRSSYI TSLDCSNTGS YPTILYVFAS DLPKGAYVEI KPILYVPSPT NDDGVPTREQ EAGGSLPASS EAFSAWSAQY SDLDDSCCQV
601: HTIGGKICSA VVSVTNDIAL KICSTTEQLY HSEEHLKALA RFCAFQLAKI LIDNGFSWDN LTMLRFYYSV EHPVTADVMS RVFSEAFAEL EEGGVGSCTP
701: DGVPIFNIVP VSASGCFTSL SDIISCELLA SKV
001: MKVVALVSGG KDSCYAMMKC IQYGHEIVAL ANLLPVDDSV DELDSYMYQT VGHQILVGYA ECMNVPLFRR RIRGSSRHQK LSYQMTPDDE VEDMFVLLSE
101: VKRQIPSITA VSSGAIASDY QRLRVESICS RLGLVSLAFL WKQDQTLLLQ DMIANGIKAI LVKVAAIGLD PSKHLGKDLA FMEPYLLKLK EKYGSNVCGE
201: GGEYETLTLD CPLFTNASIV LDEYQVVLHS PDSIAPVGVL HPSTFHLEKK GNPDSHSPEE ESSLVSEVLG DGPNTSDSTR QRDNGIVDLV EHTSNRLHIS
301: RAEKHNTFSI CCWLEDSSES SKGLKEDLET VLTELESQLL KHGYNWQHVL YIHLYISDMS EFAVANETYV KFITQEKCPF GVPSRSTIEL PLVQAGLGKA
401: YIEVLVANDE SKRVLHVQSI SCWAPSCIGP YSQATLHQSV LHMAGQLGLD PPTMNLQTEG AIAELNQALT NSEAIAESFN CSISSSAILF VVFCSARTKQ
501: SERNQLHEKF VTFLGLAKSS RRVQNVLDPM FLYILVPDLP KRALVEVKPI LYVEEDTDTE DETSRDQSGE GHYSIWGYKP EKWHQDCVQK RVVDGKVCVA
601: VLSISAELMR KLQGEEEELE IVSRFCVYLL NKTLSENSFS WQDTTSLRIH FSTSIGVSVE RLSAIFVSAF RELNEMSDGV KMDSLKEPIF NLVPVLGAGN
701: SSASLDNIIT CELFALRS
101: VKRQIPSITA VSSGAIASDY QRLRVESICS RLGLVSLAFL WKQDQTLLLQ DMIANGIKAI LVKVAAIGLD PSKHLGKDLA FMEPYLLKLK EKYGSNVCGE
201: GGEYETLTLD CPLFTNASIV LDEYQVVLHS PDSIAPVGVL HPSTFHLEKK GNPDSHSPEE ESSLVSEVLG DGPNTSDSTR QRDNGIVDLV EHTSNRLHIS
301: RAEKHNTFSI CCWLEDSSES SKGLKEDLET VLTELESQLL KHGYNWQHVL YIHLYISDMS EFAVANETYV KFITQEKCPF GVPSRSTIEL PLVQAGLGKA
401: YIEVLVANDE SKRVLHVQSI SCWAPSCIGP YSQATLHQSV LHMAGQLGLD PPTMNLQTEG AIAELNQALT NSEAIAESFN CSISSSAILF VVFCSARTKQ
501: SERNQLHEKF VTFLGLAKSS RRVQNVLDPM FLYILVPDLP KRALVEVKPI LYVEEDTDTE DETSRDQSGE GHYSIWGYKP EKWHQDCVQK RVVDGKVCVA
601: VLSISAELMR KLQGEEEELE IVSRFCVYLL NKTLSENSFS WQDTTSLRIH FSTSIGVSVE RLSAIFVSAF RELNEMSDGV KMDSLKEPIF NLVPVLGAGN
701: SSASLDNIIT CELFALRS
Arabidopsis Description
Endoribonuclease [Source:UniProtKB/TrEMBL;Acc:F4J3Q1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.