Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029925 | Potato | plasma membrane | 97.53 | 93.92 |
| PGSC0003DMT400049176 | Potato | cytosol | 33.2 | 80.4 |
| CDY42929 | Canola | plasma membrane | 61.45 | 63.1 |
| AT3G04480.1 | Thale cress | plasma membrane | 61.73 | 62.67 |
| Bra040191.1-P | Field mustard | plasma membrane | 61.18 | 62.64 |
| Bra001106.1-P | Field mustard | plasma membrane | 61.73 | 62.59 |
| CDX74189 | Canola | plasma membrane | 61.73 | 62.5 |
| CDX92070 | Canola | plasma membrane | 61.59 | 62.1 |
| KRG94883 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 63.1 | 62.08 |
| CDY49334 | Canola | plasma membrane | 60.63 | 61.99 |
| GSMUA_Achr10P... | Banana | peroxisome | 57.48 | 58.68 |
| VIT_14s0036g00850.t01 | Wine grape | mitochondrion | 59.67 | 56.13 |
| CDY20689 | Canola | extracellular | 12.35 | 55.56 |
| Os02t0810450-01 | Rice | cytosol, nucleus, peroxisome | 54.18 | 53.89 |
| KXG31325 | Sorghum | cytosol, nucleus, peroxisome | 53.77 | 53.77 |
| TraesCS6B01G415800.1 | Wheat | peroxisome | 53.09 | 53.09 |
| TraesCS6D01G362600.1 | Wheat | peroxisome | 53.09 | 52.65 |
| HORVU6Hr1G088800.8 | Barley | peroxisome | 52.95 | 52.52 |
| TraesCS6A01G378100.1 | Wheat | peroxisome | 52.95 | 52.52 |
| Zm00001d018439_P003 | Maize | cytosol | 48.97 | 46.97 |
Protein Annotations
| EnsemblPlants:Solyc04g010080.2.1 | EnsemblPlantsGene:Solyc04g010080.2 | Gene3D:3.30.1330.40 | Gene3D:3.40.50.620 | Gene3D:3.90.1490.10 | InterPro:DPH6/MJ0570 |
| InterPro:Diphthami_syn_dom | InterPro:IPR014729 | InterPro:IPR035959 | InterPro:Rossmann-like_a/b/a_fold | InterPro:RutC-like_sf | InterPro:YjgF/YER057c/UK114 |
| PANTHER:PTHR12196 | PFAM:PF01042 | PFAM:PF01902 | SEG:seg | SUPFAM:SSF52402 | SUPFAM:SSF55298 |
| TIGRFAMs:TIGR00290 | UniParc:UPI0002765E06 | UniProt:K4BPG3 | MapMan:17.5.2.2.6 | : | : |
Description
No Description!
Coordinates
chr4:+:3379820..3388745
Molecular Weight (calculated)
80695.4 Da
IEP (calculated)
4.929
GRAVY (calculated)
0.074
Length
729 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVVALVSGG KDSCYAMMKC IQYGHEIVAL ANLIPADDAI DELDSYMYQT VGHQIVVSYA KCMGLPLFRR RIRGSTRHHD LSYSMTPGDE VEDMFILLKE
101: VKRQIPSVTA VSSGAIASDY QRLRVESVCS RLGLVSLAYL WKQDQSFLLQ EMIKNGIIAI AVKVAAIGLN PSKHLGKEIA YLEPHLHKLK ELYGINVCGE
201: GGEYETLTFD CPLFKNARIV LDEFQIVLHS PDSIAPVGIL HPLAFHLENK VESISSNGID EASNLDTVFE VEGDVQQEGE AASEFVAVRS ERSGVTKQEL
301: KVSKTMKDNV FSISCWLQDS SKNSSDLQED LEVVLMRIEA LLVENGSSWE NVLYIHLYIA DMDEFAVANE TYVRFITQEK CRYGVPSRST IELPLLLVGL
401: GRAYIEVLVA NDPTKKVLHV QSISCWAPSC IGPYSQATLH NEILHMAGQL GLDPATMLLC EGGPVAELEQ ALENSEAVAR SFNCSISTSA MVFVIYCSES
501: IEKSERIIVQ KKTETLLKQM KSNHADGTKK SKVLDPIFLY VLVPDLPKRA LVEVKPMFYT GEYLSGPSDL AKQSESTEQD YCGHDISLQK CVVYGKICTV
601: ILSVTEELAG KICSLASVAC PANVMSKSLV EKEQVILIAR FCISRFDKVL SENNFSWDDI MNFRLYFASN LNISHGTLSA IFSDVFNELV QMSRVDAEPI
701: LNIVPVLGAG RSLSTLDDIF TCELIASKC
101: VKRQIPSVTA VSSGAIASDY QRLRVESVCS RLGLVSLAYL WKQDQSFLLQ EMIKNGIIAI AVKVAAIGLN PSKHLGKEIA YLEPHLHKLK ELYGINVCGE
201: GGEYETLTFD CPLFKNARIV LDEFQIVLHS PDSIAPVGIL HPLAFHLENK VESISSNGID EASNLDTVFE VEGDVQQEGE AASEFVAVRS ERSGVTKQEL
301: KVSKTMKDNV FSISCWLQDS SKNSSDLQED LEVVLMRIEA LLVENGSSWE NVLYIHLYIA DMDEFAVANE TYVRFITQEK CRYGVPSRST IELPLLLVGL
401: GRAYIEVLVA NDPTKKVLHV QSISCWAPSC IGPYSQATLH NEILHMAGQL GLDPATMLLC EGGPVAELEQ ALENSEAVAR SFNCSISTSA MVFVIYCSES
501: IEKSERIIVQ KKTETLLKQM KSNHADGTKK SKVLDPIFLY VLVPDLPKRA LVEVKPMFYT GEYLSGPSDL AKQSESTEQD YCGHDISLQK CVVYGKICTV
601: ILSVTEELAG KICSLASVAC PANVMSKSLV EKEQVILIAR FCISRFDKVL SENNFSWDDI MNFRLYFASN LNISHGTLSA IFSDVFNELV QMSRVDAEPI
701: LNIVPVLGAG RSLSTLDDIF TCELIASKC
001: MKVVALVSGG KDSCYAMMKC IQYGHEIVAL ANLLPVDDSV DELDSYMYQT VGHQILVGYA ECMNVPLFRR RIRGSSRHQK LSYQMTPDDE VEDMFVLLSE
101: VKRQIPSITA VSSGAIASDY QRLRVESICS RLGLVSLAFL WKQDQTLLLQ DMIANGIKAI LVKVAAIGLD PSKHLGKDLA FMEPYLLKLK EKYGSNVCGE
201: GGEYETLTLD CPLFTNASIV LDEYQVVLHS PDSIAPVGVL HPSTFHLEKK GNPDSHSPEE ESSLVSEVLG DGPNTSDSTR QRDNGIVDLV EHTSNRLHIS
301: RAEKHNTFSI CCWLEDSSES SKGLKEDLET VLTELESQLL KHGYNWQHVL YIHLYISDMS EFAVANETYV KFITQEKCPF GVPSRSTIEL PLVQAGLGKA
401: YIEVLVANDE SKRVLHVQSI SCWAPSCIGP YSQATLHQSV LHMAGQLGLD PPTMNLQTEG AIAELNQALT NSEAIAESFN CSISSSAILF VVFCSARTKQ
501: SERNQLHEKF VTFLGLAKSS RRVQNVLDPM FLYILVPDLP KRALVEVKPI LYVEEDTDTE DETSRDQSGE GHYSIWGYKP EKWHQDCVQK RVVDGKVCVA
601: VLSISAELMR KLQGEEEELE IVSRFCVYLL NKTLSENSFS WQDTTSLRIH FSTSIGVSVE RLSAIFVSAF RELNEMSDGV KMDSLKEPIF NLVPVLGAGN
701: SSASLDNIIT CELFALRS
101: VKRQIPSITA VSSGAIASDY QRLRVESICS RLGLVSLAFL WKQDQTLLLQ DMIANGIKAI LVKVAAIGLD PSKHLGKDLA FMEPYLLKLK EKYGSNVCGE
201: GGEYETLTLD CPLFTNASIV LDEYQVVLHS PDSIAPVGVL HPSTFHLEKK GNPDSHSPEE ESSLVSEVLG DGPNTSDSTR QRDNGIVDLV EHTSNRLHIS
301: RAEKHNTFSI CCWLEDSSES SKGLKEDLET VLTELESQLL KHGYNWQHVL YIHLYISDMS EFAVANETYV KFITQEKCPF GVPSRSTIEL PLVQAGLGKA
401: YIEVLVANDE SKRVLHVQSI SCWAPSCIGP YSQATLHQSV LHMAGQLGLD PPTMNLQTEG AIAELNQALT NSEAIAESFN CSISSSAILF VVFCSARTKQ
501: SERNQLHEKF VTFLGLAKSS RRVQNVLDPM FLYILVPDLP KRALVEVKPI LYVEEDTDTE DETSRDQSGE GHYSIWGYKP EKWHQDCVQK RVVDGKVCVA
601: VLSISAELMR KLQGEEEELE IVSRFCVYLL NKTLSENSFS WQDTTSLRIH FSTSIGVSVE RLSAIFVSAF RELNEMSDGV KMDSLKEPIF NLVPVLGAGN
701: SSASLDNIIT CELFALRS
Arabidopsis Description
Endoribonuclease [Source:UniProtKB/TrEMBL;Acc:F4J3Q1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.