Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
- plasma membrane 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27310 | Soybean | nucleus | 46.19 | 42.13 |
| GSMUA_Achr3P08070_001 | Banana | nucleus | 46.19 | 42.13 |
| GSMUA_Achr7P02260_001 | Banana | nucleus | 45.69 | 41.67 |
| KRH55144 | Soybean | nucleus | 44.67 | 40.74 |
| KRH26200 | Soybean | nucleus | 44.67 | 40.74 |
| GSMUA_Achr4P11410_001 | Banana | nucleus | 43.15 | 39.35 |
| KRH22009 | Soybean | nucleus | 45.18 | 39.21 |
| GSMUA_Achr10P... | Banana | cytosol | 45.18 | 38.53 |
| Bra019395.1-P | Field mustard | nucleus | 43.65 | 38.39 |
| CDX98731 | Canola | cytosol | 43.65 | 38.39 |
| CDX94078 | Canola | cytosol | 43.15 | 37.95 |
| CDX76384 | Canola | cytosol | 42.64 | 37.5 |
| CDX79127 | Canola | cytosol | 42.64 | 37.5 |
| CDX82909 | Canola | cytosol | 42.64 | 37.5 |
| CDY27445 | Canola | cytosol | 42.13 | 37.05 |
| AT4G04260.2 | Thale cress | cytosol | 38.07 | 36.41 |
| Bra013592.1-P | Field mustard | nucleus | 42.64 | 36.36 |
| AT4G22140.3 | Thale cress | cytosol | 43.15 | 36.32 |
| GSMUA_Achr8P22620_001 | Banana | cytosol | 46.19 | 32.97 |
| GSMUA_Achr9P25510_001 | Banana | nucleus | 35.53 | 32.56 |
| Bra020856.1-P | Field mustard | nucleus | 42.64 | 29.47 |
| CDX94076 | Canola | cytosol | 5.58 | 8.33 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P18690_001 | EnsemblPlants:GSMUA_Achr2T18690_001 | EnsemblPlantsGene:GSMUA_Achr2G18690_001 | Gene3D:2.30.30.490 | SEG:seg | UniParc:UPI0002956F8A |
| UniProt:M0S960 | MapMan:12.3.5.2.1 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G18690_001]
Coordinates
chr2:-:19023069..19023760
Molecular Weight (calculated)
22147.2 Da
IEP (calculated)
6.498
GRAVY (calculated)
-0.468
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIIKAGDSK PSFRLQNRSR RTSGLTDTGR EVVPGGQDQA RQEGSQIAAD HLNNVRVEPI RGRRQFHGAK EAYLSGHFDA HTIECECVVH SFKNYTKLEN
101: VGAEDYFCRF DYKAANWAFT PDRYSEHEMP YNPGDLMVLC EGCEDRKATF SYPLLYCFLL GSSSSPIGMP LLLPLPFPPP SLRSPFLYGW GGIDECC
101: VGAEDYFCRF DYKAANWAFT PDRYSEHEMP YNPGDLMVLC EGCEDRKATF SYPLLYCFLL GSSSSPIGMP LLLPLPFPPP SLRSPFLYGW GGIDECC
001: MAKTRPGVAS KIKTGRKELD SYTIKGTNKV VRAGDCVLMR PSDAGKPPYV ARVEKIEADA RNNVKVHCRW YYRPEESLGG RRQFHGAKEL FLSDHFDVQS
101: AHTIEGKCIV HTFKNYTRLE NVGAEDYYCR FEYKAATGAF TPDRVAVYCK CEMPYNPDDL MVQCEGCKDW YHPACVGMTI EEAKKLDHFV CAECSSDDDV
201: KKSQNGFTSS PADDVKVETK RRKR
101: AHTIEGKCIV HTFKNYTRLE NVGAEDYYCR FEYKAATGAF TPDRVAVYCK CEMPYNPDDL MVQCEGCKDW YHPACVGMTI EEAKKLDHFV CAECSSDDDV
201: KKSQNGFTSS PADDVKVETK RRKR
Arabidopsis Description
EBSChromatin remodeling protein EBS [Source:UniProtKB/Swiss-Prot;Acc:F4JL28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.