Factsheet for GSMUA_Achr9P25510_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g00160.t01	Wine grape	nucleus	73.02	73.02
Os07t0186400-01	Rice	nucleus	73.49	72.48
HORVU2Hr1G054100.1	Barley	nucleus	72.09	71.1
TraesCS2D01G242500.1	Wheat	nucleus	71.16	70.18
TraesCS2B01G257000.1	Wheat	nucleus	71.16	70.18
Zm00001d019039_P002	Maize	extracellular	71.16	69.86
PGSC0003DMT400079501	Potato	nucleus	66.51	67.77
KRH60792	Soybean	nucleus	67.91	67.59
Solyc01g110020.2.1	Tomato	nucleus	67.91	67.59
KRH51480	Soybean	nucleus	67.91	67.59
TraesCS2A01G227100.2	Wheat	nucleus	70.23	67.41
Os03t0799600-01	Rice	nucleus	67.44	66.51
GSMUA_Achr7P02260_001	Banana	nucleus	66.51	66.2
GSMUA_Achr3P08070_001	Banana	nucleus	65.58	65.28
GSMUA_Achr4P11410_001	Banana	nucleus	65.12	64.81
KRG99457	Soybean	cytosol	28.84	64.58
TraesCS5A01G445200.2	Wheat	nucleus	65.12	61.67
TraesCS5D01G453200.1	Wheat	nucleus	65.12	61.67
TraesCS5B01G450300.1	Wheat	nucleus	65.12	61.14
CDY12119	Canola	nucleus	60.93	57.21
GSMUA_Achr10P...	Banana	cytosol	60.93	56.71
AT4G39100.1	Thale cress	nucleus	59.53	56.14
OQU88587	Sorghum	nucleus	67.44	54.92
GSMUA_Achr8P22620_001	Banana	cytosol	66.98	52.17
HORVU5Hr1G106800.2	Barley	nucleus, plastid	64.19	51.11
Bra010705.1-P	Field mustard	nucleus	60.93	38.99
CDX90311	Canola	nucleus	60.93	38.99
GSMUA_Achr2P18690_001	Banana	cytosol	32.56	35.53

Protein Annotations

MapMan:12.3.5.2.1	Gene3D:2.30.30.490	Gene3D:2.60.120.650	InterPro:BAH_dom	GO:GO:0000003	GO:GO:0000976
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003682	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006325
GO:GO:0006355	GO:GO:0006464	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0035064
GO:GO:0035067	GO:GO:0046872	GO:GO:2000028	EnsemblPlantsGene:GSMUA_Achr9G25510_001	EnsemblPlants:GSMUA_Achr9P25510_001	EnsemblPlants:GSMUA_Achr9T25510_001
InterPro:IPR001025	InterPro:IPR019787	UniProt:M0U3F8	PFAM:PF00628	PFAM:PF01426	ScanProsite:PS01359
PFscan:PS50016	PFscan:PS51038	PANTHER:PTHR12505	PANTHER:PTHR12505:SF39	SMART:SM00249	SMART:SM00439
SUPFAM:SSF57903	UniParc:UPI00029627DC	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger
SEG:seg	:	:	:	:	:

Description

ES43 protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G25510_001]

Coordinates

chr9:-:29988596..29995339

Molecular Weight (calculated)

24632.0 Da

IEP (calculated)

8.252

GRAVY (calculated)

-0.799

Length

215 amino acids

Sequence
(BLAST)

001: MAKTRQGKRT LDSYTIKGTN KSIKPGDCVL MRAPDSSNPP YVARVEGIEA GGRGGVKVRV RWYYRPEESI GGRRQFHGAK EVFLSDHYDV QSADTIEGKC
101: FVHSFKNYTR LDAVGNDDFF CRFEYRSATG SFVPDRIAVF CKCEMPYNPD DLMIQCEGCY DWYHPTCIDM AVEDAKKIEH FFCQSCTTEN GKETEKSHNG
201: SKQSDMKVDP KRRRR

Best Arabidopsis Sequence Match ( AT4G22140.2 )
(BLAST)

001: MAKTRPGVAS KIKTGRKELD SYTIKGTNKV VRAGDCVLMR PSDAGKPPYV ARVEKIEADA RNNVKVHCRW YYRPEESLGG RRQFHGAKEL FLSDHFDVQS
101: AHTIEGKCIV HTFKNYTRLE NVGAEDYYCR FEYKAATGAF TPDRVAVYCK CEMPYNPDDL MVQCEGCKDW YHPACVGMTI EEAKKLDHFV CAECSSDDDV
201: KKSQNGFTSS PADDVKVETK RRKR

Arabidopsis Description

EBSChromatin remodeling protein EBS [Source:UniProtKB/Swiss-Prot;Acc:F4JL28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.