Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G22140.3 | Thale cress | cytosol | 73.79 | 64.96 |
| KRH27310 | Soybean | nucleus | 67.48 | 64.35 |
| KRH26200 | Soybean | nucleus | 66.5 | 63.43 |
| VIT_10s0116g00160.t01 | Wine grape | nucleus | 66.02 | 63.26 |
| KRH55144 | Soybean | nucleus | 66.02 | 62.96 |
| KRH22009 | Soybean | nucleus | 68.45 | 62.11 |
| GSMUA_Achr7P02260_001 | Banana | nucleus | 64.08 | 61.11 |
| GSMUA_Achr3P08070_001 | Banana | nucleus | 62.62 | 59.72 |
| PGSC0003DMT400043085 | Potato | nucleus | 59.71 | 58.29 |
| TraesCS5D01G208000.1 | Wheat | nucleus | 59.71 | 56.94 |
| TraesCS5B01G200300.1 | Wheat | nucleus | 59.71 | 56.94 |
| Zm00001d050330_P003 | Maize | cytosol, nucleus, plastid | 58.74 | 56.02 |
| Os09t0386500-01 | Rice | nucleus | 58.74 | 56.02 |
| GSMUA_Achr4P11410_001 | Banana | nucleus | 58.74 | 56.02 |
| HORVU5Hr1G059960.1 | Barley | cytosol, nucleus, plastid | 58.74 | 55.5 |
| Zm00001d020361_P001 | Maize | cytosol, nucleus, plastid | 57.77 | 55.35 |
| Os08t0421900-01 | Rice | nucleus | 57.28 | 54.63 |
| EER96695 | Sorghum | nucleus | 57.28 | 54.63 |
| Solyc02g081130.1.1 | Tomato | nucleus | 54.85 | 53.55 |
| Zm00001d032263_P001 | Maize | cytosol, nucleus, plastid | 49.03 | 49.27 |
| GSMUA_Achr10P... | Banana | cytosol | 54.37 | 48.48 |
| AT4G39100.1 | Thale cress | nucleus | 52.43 | 47.37 |
| GSMUA_Achr8P22620_001 | Banana | cytosol | 63.11 | 47.1 |
| KXG25172 | Sorghum | mitochondrion, plastid | 57.77 | 43.27 |
| TraesCS5A01G201700.1 | Wheat | nucleus, plastid | 59.71 | 43.16 |
| HORVU5Hr1G059970.1 | Barley | mitochondrion | 59.71 | 38.44 |
| GSMUA_Achr2P18690_001 | Banana | cytosol | 36.41 | 38.07 |
| Zm00001d005705_P001 | Maize | plastid | 42.23 | 35.22 |
Protein Annotations
| MapMan:12.3.5.2.1 | Gene3D:2.30.30.490 | Gene3D:3.30.40.10 | EntrezGene:825742 | UniProt:A0A1P8B5U4 | ProteinID:ANM66963.1 |
| ArrayExpress:AT4G04260 | EnsemblPlantsGene:AT4G04260 | RefSeq:AT4G04260 | TAIR:AT4G04260 | RefSeq:AT4G04260-TAIR-G | EnsemblPlants:AT4G04260.2 |
| InterPro:BAH_dom | GO:GO:0000785 | GO:GO:0000976 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003682 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005677 | GO:GO:0006139 | GO:GO:0006325 | GO:GO:0006342 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016569 | GO:GO:0019538 | GO:GO:0031507 | GO:GO:0035064 |
| GO:GO:0035067 | GO:GO:0040029 | GO:GO:0046872 | InterPro:IPR001025 | InterPro:IPR013083 | RefSeq:NP_001328826.1 |
| PFAM:PF01426 | PFscan:PS51038 | PANTHER:PTHR12505 | PANTHER:PTHR12505:SF39 | SMART:SM00439 | SUPFAM:SSF57903 |
| UniParc:UPI0008490656 | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | : | : | : |
Description
Bromo-adjacent homology (BAH) domain-containing protein [Source:TAIR;Acc:AT4G04260]
Coordinates
chr4:+:2054037..2055849
Molecular Weight (calculated)
23473.9 Da
IEP (calculated)
6.028
GRAVY (calculated)
-0.312
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVLCAFLGD CVLMRPSDAG KAPYVARVEK IEADARNNVK VHCRWYYCPE ESHGGRRQLH GAKELFLSDH FDVQSAHTIE GKCIVHTFKN YTRLENVGVE
101: DYYCIFDYKA ATGAFTPDRV AVYYKCEMPY NSDELMELLL CHYRVHLACV GVTIEEAKKL EHFVCVECSS DEDGVKRFQN GFASSTTNDL KPSAEKMIDV
201: RASYEL
101: DYYCIFDYKA ATGAFTPDRV AVYYKCEMPY NSDELMELLL CHYRVHLACV GVTIEEAKKL EHFVCVECSS DEDGVKRFQN GFASSTTNDL KPSAEKMIDV
201: RASYEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.