Factsheet for Zm00001d005705_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96695	Sorghum	nucleus	55.06	62.96
Zm00001d020361_P001	Maize	cytosol, nucleus, plastid	54.66	62.79
TraesCS5D01G208000.1	Wheat	nucleus	49.39	56.48
TraesCS5B01G200300.1	Wheat	nucleus	49.39	56.48
HORVU5Hr1G059960.1	Barley	cytosol, nucleus, plastid	49.39	55.96
Zm00001d032263_P001	Maize	cytosol, nucleus, plastid	45.34	54.63
Os09t0386500-01	Rice	nucleus	47.77	54.63
Zm00001d050330_P003	Maize	cytosol, nucleus, plastid	46.15	52.78
Solyc05g042030.2.1	Tomato	nucleus	44.53	51.89
VIT_12s0059g01180.t01	Wine grape	nucleus	44.94	51.63
GSMUA_Achr4P11410_001	Banana	nucleus	44.13	50.46
KRH27310	Soybean	nucleus	44.13	50.46
KRH55144	Soybean	nucleus	43.72	50.0
Solyc07g049210.2.1	Tomato	nucleus	43.72	50.0
KRH26200	Soybean	nucleus	43.72	50.0
PGSC0003DMT400043916	Potato	nucleus	44.94	48.68
KRH22009	Soybean	nucleus	44.13	48.02
CDY27445	Canola	cytosol	42.51	46.88
CDX94078	Canola	cytosol	42.51	46.88
PGSC0003DMT400001796	Potato	nucleus	44.13	46.58
CDX98731	Canola	cytosol	42.11	46.43
CDX76384	Canola	cytosol	42.11	46.43
TraesCS5A01G201700.1	Wheat	nucleus, plastid	53.44	46.32
CDX82909	Canola	cytosol	41.7	45.98
Bra019395.1-P	Field mustard	nucleus	41.7	45.98
CDX79127	Canola	cytosol	41.3	45.54
AT4G22140.3	Thale cress	cytosol	42.51	44.87
Bra013592.1-P	Field mustard	nucleus	41.7	44.59
Zm00001d019039_P002	Maize	extracellular	38.46	43.38
AT4G04260.2	Thale cress	cytosol	35.22	42.23
HORVU5Hr1G059970.1	Barley	mitochondrion	53.44	41.25
Bra020856.1-P	Field mustard	nucleus	42.51	36.84
CDX94076	Canola	cytosol	1.21	2.27

Protein Annotations

EnsemblPlants:Zm00001d005705_P001	EnsemblPlants:Zm00001d005705_T001	EnsemblPlantsGene:Zm00001d005705	Gene3D:2.30.30.490	GO:GO:0003674	GO:GO:0003682
GO:GO:0005488	InterPro:BAH_dom	InterPro:IPR001025	PANTHER:PTHR12505	PANTHER:PTHR12505:SF39	PFAM:PF01426
PFscan:PS51038	ProteinID:ONM21687.1	SEG:seg	SMART:SM00439	UniParc:UPI000843063D	UniProt:A0A1D6EPI9
MapMan:12.3.5.2.1	:	:	:	:	:

Description

Chromatin remodeling protein EBS

Coordinates

chr2:+:183947295..183952261

Molecular Weight (calculated)

27490.7 Da

IEP (calculated)

10.424

GRAVY (calculated)

-0.701

Length

247 amino acids

Sequence
(BLAST)

001: MGSLSQPTQE APNILALCGV NGKAKRSHQV RRPNQQQPPS DGREQPLATW IQTPRHSNRV ETTKLPLAPS LSLPAAAPSE RTTAAIPQPP LLLHTRTARV
101: RSQSSLYAMA KTKQGKRDVD AYTIKGTNKV VRVGDCVLMR PADTDKPPYV ARVERMESDG RGGVRVRVRW YYRPEEAKGG RRPFHGSKEL FLSDHLDTQS
201: AHTIEGKCIV HSFKSYTKLD NVGPEDFYCR FDYKAATGAF TPDRVAV

Best Arabidopsis Sequence Match ( AT4G04260.2 )
(BLAST)

001: MQVLCAFLGD CVLMRPSDAG KAPYVARVEK IEADARNNVK VHCRWYYCPE ESHGGRRQLH GAKELFLSDH FDVQSAHTIE GKCIVHTFKN YTRLENVGVE
101: DYYCIFDYKA ATGAFTPDRV AVYYKCEMPY NSDELMELLL CHYRVHLACV GVTIEEAKKL EHFVCVECSS DEDGVKRFQN GFASSTTNDL KPSAEKMIDV
201: RASYEL

Arabidopsis Description

Bromo-adjacent homology (BAH) domain-containing protein [Source:TAIR;Acc:AT4G04260]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.