Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_12s0059g01180.t01 | Wine grape | nucleus | 90.28 | 90.7 |
Solyc05g042030.2.1 | Tomato | nucleus | 88.43 | 90.09 |
PGSC0003DMT400001796 | Potato | nucleus | 93.98 | 86.75 |
GSMUA_Achr7P02260_001 | Banana | nucleus | 83.8 | 83.8 |
GSMUA_Achr3P08070_001 | Banana | nucleus | 82.41 | 82.41 |
TraesCS5D01G208000.1 | Wheat | nucleus | 77.31 | 77.31 |
TraesCS5B01G200300.1 | Wheat | nucleus | 76.85 | 76.85 |
Os09t0386500-01 | Rice | nucleus | 76.39 | 76.39 |
EER96695 | Sorghum | nucleus | 75.46 | 75.46 |
Os08t0421900-01 | Rice | nucleus | 74.54 | 74.54 |
HORVU5Hr1G059960.1 | Barley | cytosol, nucleus, plastid | 74.07 | 73.39 |
Zm00001d050330_P003 | Maize | cytosol, nucleus, plastid | 72.69 | 72.69 |
Zm00001d020361_P001 | Maize | cytosol, nucleus, plastid | 72.22 | 72.56 |
GSMUA_Achr8P22620_001 | Banana | cytosol | 85.19 | 66.67 |
Solyc01g110020.2.1 | Tomato | nucleus | 66.2 | 66.2 |
Zm00001d032263_P001 | Maize | cytosol, nucleus, plastid | 62.5 | 65.85 |
Solyc02g081130.1.1 | Tomato | nucleus | 63.43 | 64.93 |
KXG25172 | Sorghum | mitochondrion, plastid | 75.46 | 59.27 |
TraesCS5A01G201700.1 | Wheat | nucleus, plastid | 76.85 | 58.25 |
HORVU5Hr1G059970.1 | Barley | mitochondrion | 76.85 | 51.88 |
Zm00001d005705_P001 | Maize | plastid | 50.0 | 43.72 |
Protein Annotations
MapMan:12.3.5.2.1 | Gene3D:2.30.30.490 | Gene3D:3.30.40.10 | InterPro:BAH_dom | GO:GO:0000785 | GO:GO:0000976 |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 | GO:GO:0005488 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005677 | GO:GO:0006139 |
GO:GO:0006342 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
GO:GO:0031507 | GO:GO:0040029 | GO:GO:0046872 | InterPro:IPR001025 | InterPro:IPR013083 | InterPro:IPR019787 |
UniProt:K4CF25 | PFAM:PF00628 | PFAM:PF01426 | ScanProsite:PS01359 | PFscan:PS50016 | PFscan:PS51038 |
PANTHER:PTHR12505 | PANTHER:PTHR12505:SF39 | SMART:SM00249 | SMART:SM00439 | SUPFAM:SSF57903 | EnsemblPlantsGene:Solyc07g049210.2 |
EnsemblPlants:Solyc07g049210.2.1 | UniParc:UPI000276B051 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
InterPro:Znf_RING/FYVE/PHD | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:-:59497977..59502695
Molecular Weight (calculated)
24827.3 Da
IEP (calculated)
7.955
GRAVY (calculated)
-0.826
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTKPGKKD LDSYSIKGTN KVVRPGDCVL MRPSDSDKPP YVAKVEKLEA DHRNNVKVRV RWYYRPEESI GGRRQFHGAK ELFLSDHFDV QSAHTIEGKC
101: IVHSFKNYTK LENVAPEDYF SRFEYKAATG GFTPDRVAVY CKCEMPYNPD DLMVQCEGCK DWFHPSCMGM SIDEAKTLEH FLCSDCSSED ETKRPLNSFH
201: VSPPDEAKVE SKRRKR
101: IVHSFKNYTK LENVAPEDYF SRFEYKAATG GFTPDRVAVY CKCEMPYNPD DLMVQCEGCK DWFHPSCMGM SIDEAKTLEH FLCSDCSSED ETKRPLNSFH
201: VSPPDEAKVE SKRRKR
001: MAKTRPGVAS KIKTGRKELD SYTIKGTNKV VRAGDCVLMR PSDAGKPPYV ARVEKIEADA RNNVKVHCRW YYRPEESLGG RRQFHGAKEL FLSDHFDVQS
101: AHTIEGKCIV HTFKNYTRLE NVGAEDYYCR FEYKAATGAF TPDRVAVYCK CEMPYNPDDL MVQCEGCKDW YHPACVGMTI EEAKKLDHFV CAECSSDDDV
201: KKSQNGFTSS PADDVKVETK RRKR
101: AHTIEGKCIV HTFKNYTRLE NVGAEDYYCR FEYKAATGAF TPDRVAVYCK CEMPYNPDDL MVQCEGCKDW YHPACVGMTI EEAKKLDHFV CAECSSDDDV
201: KKSQNGFTSS PADDVKVETK RRKR
Arabidopsis Description
EBSChromatin remodeling protein EBS [Source:UniProtKB/Swiss-Prot;Acc:F4JL28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.