Factsheet for Os09t0386500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G208000.1	Wheat	nucleus	90.74	90.74
TraesCS5B01G200300.1	Wheat	nucleus	90.28	90.28
HORVU5Hr1G059960.1	Barley	cytosol, nucleus, plastid	87.5	86.7
EER96695	Sorghum	nucleus	85.65	85.65
Zm00001d020361_P001	Maize	cytosol, nucleus, plastid	83.33	83.72
Os08t0421900-01	Rice	nucleus	82.87	82.87
VIT_12s0059g01180.t01	Wine grape	nucleus	77.78	78.14
Solyc07g049210.2.1	Tomato	nucleus	76.39	76.39
KRH27310	Soybean	nucleus	76.39	76.39
KRH26200	Soybean	nucleus	76.39	76.39
KRH55144	Soybean	nucleus	75.93	75.93
GSMUA_Achr4P11410_001	Banana	nucleus	75.93	75.93
Solyc05g042030.2.1	Tomato	nucleus	73.61	75.0
KRH22009	Soybean	nucleus	74.54	70.93
CDX98731	Canola	cytosol	73.15	70.54
PGSC0003DMT400043916	Potato	nucleus	74.07	70.18
CDX94078	Canola	cytosol	72.69	70.09
Bra019395.1-P	Field mustard	nucleus	72.69	70.09
PGSC0003DMT400001796	Potato	nucleus	75.46	69.66
CDX79127	Canola	cytosol	72.22	69.64
CDX82909	Canola	cytosol	71.76	69.2
TraesCS5A01G201700.1	Wheat	nucleus, plastid	90.28	68.42
CDX76384	Canola	cytosol	70.37	67.86
CDY27445	Canola	cytosol	69.91	67.41
Os07t0186400-01	Rice	nucleus	66.2	65.6
Bra013592.1-P	Field mustard	nucleus	69.44	64.94
AT4G22140.3	Thale cress	cytosol	69.91	64.53
HORVU5Hr1G059970.1	Barley	mitochondrion	90.28	60.94
Os03t0799600-01	Rice	nucleus	60.19	59.63
AT4G04260.2	Thale cress	cytosol	56.02	58.74
Bra020856.1-P	Field mustard	nucleus	68.98	52.28
Zm00001d005705_P001	Maize	plastid	54.63	47.77
CDX94076	Canola	cytosol	15.28	25.0

Protein Annotations

MapMan:12.3.5.2.1	Gene3D:2.30.30.490	Gene3D:2.60.120.650	EntrezGene:4346950	EMBL:AK064072	EMBL:AK099307
ProteinID:BAD26108.1	ProteinID:BAF24989.1	InterPro:BAH_dom	ProteinID:BAT07887.1	ProteinID:EEE69628.1	GO:GO:0000287
GO:GO:0000785	GO:GO:0000976	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003682
GO:GO:0003824	GO:GO:0004722	GO:GO:0004743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0005677	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0006342	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0016787	GO:GO:0019538	GO:GO:0030955	GO:GO:0031507	GO:GO:0040029	GO:GO:0046872
InterPro:IPR001025	InterPro:IPR019787	EnsemblPlantsGene:Os09g0386500	EnsemblPlants:Os09t0386500-01	PFAM:PF00628	PFAM:PF01426
ScanProsite:PS01359	PFscan:PS50016	PFscan:PS51038	PANTHER:PTHR12505	PANTHER:PTHR12505:SF39	UniProt:Q6H591
SMART:SM00249	SMART:SM00439	SUPFAM:SSF57903	UniParc:UPI00003B461A	RefSeq:XP_015651192.1	InterPro:Zinc_finger_PHD-type_CS
InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	SEG:seg	:	:

Description

Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0386500-01)

Coordinates

chr9:+:13181330..13184736

Molecular Weight (calculated)

24665.3 Da

IEP (calculated)

8.954

GRAVY (calculated)

-0.807

Length

216 amino acids

Sequence
(BLAST)

001: MAKTKQGKKD VESYTIKGTT KIVRVGDCVL MRASDTEKAP YVGRVERLET DGRGSVRVRV RWYYRPEESK GGRRQFHGAK ELFLSDHFDT QSAHTIEGKC
101: VVHSFKNYTK LDNVGPEDFF CRFEYKAATG AFTPDRVAVY CKCEMPYNPD DLMVQCEGCK DWFHPSCMGM TIEQAKKLDH FLCADCVKEN GTKRPSNSYP
201: ASSNSDSKVE PKKRKR

Best Arabidopsis Sequence Match ( AT4G22140.2 )
(BLAST)

001: MAKTRPGVAS KIKTGRKELD SYTIKGTNKV VRAGDCVLMR PSDAGKPPYV ARVEKIEADA RNNVKVHCRW YYRPEESLGG RRQFHGAKEL FLSDHFDVQS
101: AHTIEGKCIV HTFKNYTRLE NVGAEDYYCR FEYKAATGAF TPDRVAVYCK CEMPYNPDDL MVQCEGCKDW YHPACVGMTI EEAKKLDHFV CAECSSDDDV
201: KKSQNGFTSS PADDVKVETK RRKR

Arabidopsis Description

EBSChromatin remodeling protein EBS [Source:UniProtKB/Swiss-Prot;Acc:F4JL28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.