Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76384 | Canola | cytosol | 99.55 | 99.55 |
| CDX94078 | Canola | cytosol | 95.54 | 95.54 |
| CDX82909 | Canola | cytosol | 95.09 | 95.09 |
| CDX98731 | Canola | cytosol | 95.09 | 95.09 |
| CDX79127 | Canola | cytosol | 94.64 | 94.64 |
| AT4G22140.3 | Thale cress | cytosol | 92.86 | 88.89 |
| KRH27310 | Soybean | nucleus | 81.25 | 84.26 |
| KRH26200 | Soybean | nucleus | 79.91 | 82.87 |
| KRH55144 | Soybean | nucleus | 79.91 | 82.87 |
| VIT_10s0116g00160.t01 | Wine grape | nucleus | 77.68 | 80.93 |
| KRH22009 | Soybean | nucleus | 81.7 | 80.62 |
| GSMUA_Achr7P02260_001 | Banana | nucleus | 75.45 | 78.24 |
| GSMUA_Achr3P08070_001 | Banana | nucleus | 75.45 | 78.24 |
| Bra020856.1-P | Field mustard | nucleus | 96.88 | 76.14 |
| GSMUA_Achr4P11410_001 | Banana | nucleus | 72.32 | 75.0 |
| TraesCS5D01G208000.1 | Wheat | nucleus | 68.3 | 70.83 |
| PGSC0003DMT400043085 | Potato | nucleus | 66.52 | 70.62 |
| TraesCS5B01G200300.1 | Wheat | nucleus | 67.86 | 70.37 |
| EER96695 | Sorghum | nucleus | 67.86 | 70.37 |
| Os09t0386500-01 | Rice | nucleus | 67.41 | 69.91 |
| Zm00001d050330_P003 | Maize | cytosol, nucleus, plastid | 66.96 | 69.44 |
| Zm00001d020361_P001 | Maize | cytosol, nucleus, plastid | 65.18 | 67.91 |
| Os08t0421900-01 | Rice | nucleus | 65.18 | 67.59 |
| HORVU5Hr1G059960.1 | Barley | cytosol, nucleus, plastid | 65.62 | 67.43 |
| Solyc02g081130.1.1 | Tomato | nucleus | 61.16 | 64.93 |
| GSMUA_Achr10P... | Banana | cytosol | 64.73 | 62.77 |
| GSMUA_Achr8P22620_001 | Banana | cytosol | 75.0 | 60.87 |
| Zm00001d032263_P001 | Maize | cytosol, nucleus, plastid | 54.91 | 60.0 |
| CDY12119 | Canola | nucleus | 57.14 | 55.9 |
| KXG25172 | Sorghum | mitochondrion, plastid | 66.52 | 54.18 |
| TraesCS5A01G201700.1 | Wheat | nucleus, plastid | 67.86 | 53.33 |
| HORVU5Hr1G059970.1 | Barley | mitochondrion | 67.86 | 47.5 |
| Zm00001d005705_P001 | Maize | plastid | 46.88 | 42.51 |
| GSMUA_Achr2P18690_001 | Banana | cytosol | 37.05 | 42.13 |
| CDX90311 | Canola | nucleus | 57.14 | 38.1 |
| CDX94076 | Canola | cytosol | 22.32 | 37.88 |
Protein Annotations
| MapMan:12.3.5.2.1 | Gene3D:2.30.30.490 | Gene3D:2.60.120.650 | GO:A0A078GLH5 | UniProt:A0A078GLH5 | InterPro:BAH_dom |
| EnsemblPlants:CDY27445 | ProteinID:CDY27445 | ProteinID:CDY27445.1 | GO:GO:0003674 | GO:GO:0003682 | GO:GO:0005488 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00037436001 | InterPro:IPR001025 | InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF01426 |
| ScanProsite:PS01359 | PFscan:PS50016 | PFscan:PS51038 | PANTHER:PTHR12505 | PANTHER:PTHR12505:SF39 | SMART:SM00249 |
| SMART:SM00439 | SUPFAM:SSF57903 | UniParc:UPI0004EBD1B2 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | : | : | : | : | : |
Description
BnaC03g64850DBnaC03g64850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLH5]
Coordinates
chrLK032204:-:449574..452027
Molecular Weight (calculated)
25413.0 Da
IEP (calculated)
8.248
GRAVY (calculated)
-0.711
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTRPGVPS KIKTGRKELD TYTIKGTNKV VRAGDYVLMR PSDAGKPPYV ARVEKIEADA RNNVKVHCRW YYRPEESLGG RRQFHGAKEL FLSDHFDVQS
101: AHTIEGKCIV HTFKSYTRLE NVGAEDYYCR FEYKAATGAF TPDRVAVYCK CEMPYNPDDL MVQCDGCKDW YHPACVGMTT EEAKLLDHFA CAECSSDDDV
201: KKSQNGFTAS PADDVKVEAK RRKR
101: AHTIEGKCIV HTFKSYTRLE NVGAEDYYCR FEYKAATGAF TPDRVAVYCK CEMPYNPDDL MVQCDGCKDW YHPACVGMTT EEAKLLDHFA CAECSSDDDV
201: KKSQNGFTAS PADDVKVEAK RRKR
001: MRPSDAGKAP YVARVEKIEA DARNNVKVHC RWYYCPEESH GGRRQLHGAK ELFLSDHFDV QSAHTIEGKC IVHTFKNYTR LENVGVEDYY CIFDYKAATG
101: AFTPDRVAVY YKCEMPYNSD ELMELLLCHY RVHLACVGVT IEEAKKLEHF VCVECSSDED GVKRFQNGFA SSTTNDLKPS AEKMIDVRAS YEL
101: AFTPDRVAVY YKCEMPYNSD ELMELLLCHY RVHLACVGVT IEEAKKLEHF VCVECSSDED GVKRFQNGFA SSTTNDLKPS AEKMIDVRAS YEL
Arabidopsis Description
Bromo-adjacent homology (BAH) domain-containing protein [Source:TAIR;Acc:AT4G04260]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.