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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:nucleus
Plant-mPloc:cytosol, mitochondrion, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G415200.1 Wheat cytosol, nucleus, plastid 64.97 22.95
TraesCS6D01G400800.1 Wheat cytosol, nucleus, plastid 64.41 22.75
HORVU6Hr1G094240.3 Barley nucleus, plastid 64.97 21.66
Os02t0829600-01 Rice plastid 63.84 21.65
EES07813 Sorghum plastid 60.45 21.57
Zm00001d018533_P003 Maize plastid 62.15 21.03
VIT_01s0010g01230.t01 Wine grape plastid 68.36 20.47
Solyc04g009340.2.1 Tomato nucleus 64.97 20.46
CDY42216 Canola cytosol, mitochondrion, plastid 57.63 20.4
PGSC0003DMT400082437 Potato plastid 64.41 20.39
KRH29221 Soybean nucleus 64.41 19.49
KRH24219 Soybean nucleus 64.41 19.42
AT3G19895.1 Thale cress plastid 59.32 18.95
CDY33428 Canola plastid 57.63 18.55
Bra038238.1-P Field mustard plastid 57.63 18.48
GSMUA_Achr1P17210_001 Banana nucleus 38.42 16.46
GSMUA_Achr11P... Banana cytosol, extracellular, peroxisome 12.43 4.65
GSMUA_Achr4P11710_001 Banana plastid 0.0 0.0
TraesCS7B01G331900.1 Wheat cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:GSMUA_Achr4P11720_001EnsemblPlants:GSMUA_Achr4T11720_001EnsemblPlantsGene:GSMUA_Achr4G11720_001Gene3D:3.30.40.10InterPro:IPR013083InterPro:Znf_RING/FYVE/PHD
ncoils:CoilPANTHER:PTHR33644PANTHER:PTHR33644:SF1UniParc:UPI000296D56AUniProt:M0SN37MapMan:35.1
Description
Putative U-box domain-containing protein 62 [Source:GMGC_GENE;Acc:GSMUA_Achr4G11720_001]
Coordinates
chr4:+:8524547..8526425
Molecular Weight (calculated)
19796.2 Da
IEP (calculated)
9.874
GRAVY (calculated)
-0.363
Length
177 amino acids
Sequence
(BLAST)
001: MVVSCGHSFG GHMLKKVIEM ARCNICNEEI ETGMLIPNYA VRAAATTVKM EDDKRLFHNA ALRKRRKEVG EQMEALKRLA KVNGEIAAES DGPRQLKGVQ
101: YPFVVNEKVL IKGNKRTADK LVGKEAIITS QCLNGWYLLK ILDSGESVRL QYRSLQKLPS SQADDRIQPQ PLLISSN
Best Arabidopsis Sequence Match ( AT3G19895.1 )
(BLAST)
001: MHRQGSSPIT PSNYNAAVSI ASDVPTGLTK SPLSHAIPVS PISAAYPSGD PILMMSGTPL ARVRLSEILP YEGAPSPVYA KAVEALSVSL MRYNASVIEI
101: GSEDTALMRC GLEAARLYFR TRSLTVSGKG NRGLSMYRAG RSVEDLDSSP PCMAEIFRCL GKVARAALSA IARHLRLRSD VFNHMLDDFP LAPNEVSSSV
201: LLASYAHASI QNGKHASGGG NLSAKIEVEK GLLTLFCSDG TGIQVCDPNG RWYTADNGCG VGDLLLITGK ALSHATAGLR PAASYRTTTD HLSATDTRGR
301: ASLAFRLMPK SNAILDCSPI EAAGHVIPQS YVPVSVSQFM DNLLAENDTL VNPPVKTNVP RDDVCKEPSL RSVLSDPISG AFLEDAMVVS CGHSFGGLML
401: RRVLEMSRCT LCNTEIESGS LVPNHALRAA ASAIKQQDDK RLFHNAAMRR RRKEMSDQMD VENGDPATDD GMHRVVHYPF AVNEKVLIKG NRRTPEKFVG
501: KEAIVTSQCL NGWYLLKIVE SGDNVRLQYR SLKKMVNDDR GGGLQAQPVE SNSL
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GWB1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.