Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 5
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24219 | Soybean | nucleus | 87.69 | 87.39 |
| VIT_01s0010g01230.t01 | Wine grape | plastid | 69.91 | 69.2 |
| CDY42216 | Canola | cytosol, mitochondrion, plastid | 57.27 | 67.0 |
| PGSC0003DMT400082437 | Potato | plastid | 63.59 | 66.55 |
| Solyc04g009340.2.1 | Tomato | nucleus | 63.59 | 66.19 |
| GSMUA_Achr4P11720_001 | Banana | cytosol | 19.49 | 64.41 |
| Bra038238.1-P | Field mustard | plastid | 58.29 | 61.78 |
| AT3G19895.1 | Thale cress | plastid | 58.29 | 61.55 |
| CDY33428 | Canola | plastid | 57.44 | 61.09 |
| TraesCS7B01G331900.1 | Wheat | cytosol | 30.43 | 56.87 |
| EES07813 | Sorghum | plastid | 47.35 | 55.85 |
| TraesCS6A01G415200.1 | Wheat | cytosol, nucleus, plastid | 47.69 | 55.69 |
| TraesCS6D01G400800.1 | Wheat | cytosol, nucleus, plastid | 47.52 | 55.49 |
| GSMUA_Achr4P11710_001 | Banana | plastid | 36.41 | 53.92 |
| Os02t0829600-01 | Rice | plastid | 47.52 | 53.26 |
| HORVU6Hr1G094240.3 | Barley | nucleus, plastid | 47.52 | 52.35 |
| Zm00001d018533_P003 | Maize | plastid | 46.15 | 51.63 |
| KRH13671 | Soybean | cytosol | 19.49 | 26.82 |
| KRH53725 | Soybean | nucleus | 18.46 | 25.23 |
| KRH64207 | Soybean | nucleus | 18.29 | 25.12 |
| KRH43789 | Soybean | nucleus | 20.68 | 24.01 |
Protein Annotations
| EMBL:ACUP02006790 | EnsemblPlants:KRH29221 | EnsemblPlantsGene:GLYMA_11G104000 | EntrezGene:100794424 | Gene3D:2.60.120.330 | Gene3D:3.30.40.10 |
| InterPro:IPNS-like | InterPro:IPR013083 | InterPro:IPR027443 | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR33644 | PANTHER:PTHR33644:SF1 |
| ProteinID:KRH29221 | ProteinID:KRH29221.1 | SEG:seg | SUPFAM:SSF51197 | SUPFAM:SSF57850 | SUPFAM:SSF81995 |
| UniParc:UPI000233C995 | UniProt:I1LIW1 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:7893975..7902365
Molecular Weight (calculated)
63030.5 Da
IEP (calculated)
8.479
GRAVY (calculated)
-0.247
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAIMQQQQQ HQQQQQNPSA LVPPQLKNPQ SSTTTTTATT TPLRSPSAQS PLSVVQPIRQ PPPPSHPVVP VTTVEPGLTA VPTCPLVRVR LSDIAPYDGA
101: PGGPYLRAME ALCGSLLRHN AALIELGNED TALMRCGLEG ARLFFRSRAH LGSGKGSRGV YMYRAGRALE DWDSSPPCMA DIFRCMGKAS RSALCAIARH
201: LRLRSDVFNH LLDDAPLPAN EVSSSVLVVT YSHASLQNGR GAIGGSKPTM NGEVEKGLLT LISSDTPGLQ VCDPSGRWYL ADSGFGPGDL LLITGKALSH
301: ATAGLCPAAS YRASPDYFLS PNGGGRSSLA YRLMPQGNAI LDCSPIAAAG HVIPQSYVRI SVSQFMDDLA AEELIGSRCD NADAAAQHNV NKEPSLRSVL
401: SDPLSGTFLE DAMLVSCGHS FGGLMLRRVI ETSKCTLCNV EIETGSLIPN HALRAAAAAV KHEDDRRLFR NAALRKRRKE MGDQMDSMRR VNGENGDFTA
501: ADGLQRGVQY PFLVNEKVVI KGNRRTPEKF VGKEAVITSQ CLNGWYLLKI IETGENVRLQ YRSLRKLLNS PADQCPSQPI QNSSS
101: PGGPYLRAME ALCGSLLRHN AALIELGNED TALMRCGLEG ARLFFRSRAH LGSGKGSRGV YMYRAGRALE DWDSSPPCMA DIFRCMGKAS RSALCAIARH
201: LRLRSDVFNH LLDDAPLPAN EVSSSVLVVT YSHASLQNGR GAIGGSKPTM NGEVEKGLLT LISSDTPGLQ VCDPSGRWYL ADSGFGPGDL LLITGKALSH
301: ATAGLCPAAS YRASPDYFLS PNGGGRSSLA YRLMPQGNAI LDCSPIAAAG HVIPQSYVRI SVSQFMDDLA AEELIGSRCD NADAAAQHNV NKEPSLRSVL
401: SDPLSGTFLE DAMLVSCGHS FGGLMLRRVI ETSKCTLCNV EIETGSLIPN HALRAAAAAV KHEDDRRLFR NAALRKRRKE MGDQMDSMRR VNGENGDFTA
501: ADGLQRGVQY PFLVNEKVVI KGNRRTPEKF VGKEAVITSQ CLNGWYLLKI IETGENVRLQ YRSLRKLLNS PADQCPSQPI QNSSS
001: MHRQGSSPIT PSNYNAAVSI ASDVPTGLTK SPLSHAIPVS PISAAYPSGD PILMMSGTPL ARVRLSEILP YEGAPSPVYA KAVEALSVSL MRYNASVIEI
101: GSEDTALMRC GLEAARLYFR TRSLTVSGKG NRGLSMYRAG RSVEDLDSSP PCMAEIFRCL GKVARAALSA IARHLRLRSD VFNHMLDDFP LAPNEVSSSV
201: LLASYAHASI QNGKHASGGG NLSAKIEVEK GLLTLFCSDG TGIQVCDPNG RWYTADNGCG VGDLLLITGK ALSHATAGLR PAASYRTTTD HLSATDTRGR
301: ASLAFRLMPK SNAILDCSPI EAAGHVIPQS YVPVSVSQFM DNLLAENDTL VNPPVKTNVP RDDVCKEPSL RSVLSDPISG AFLEDAMVVS CGHSFGGLML
401: RRVLEMSRCT LCNTEIESGS LVPNHALRAA ASAIKQQDDK RLFHNAAMRR RRKEMSDQMD VENGDPATDD GMHRVVHYPF AVNEKVLIKG NRRTPEKFVG
501: KEAIVTSQCL NGWYLLKIVE SGDNVRLQYR SLKKMVNDDR GGGLQAQPVE SNSL
101: GSEDTALMRC GLEAARLYFR TRSLTVSGKG NRGLSMYRAG RSVEDLDSSP PCMAEIFRCL GKVARAALSA IARHLRLRSD VFNHMLDDFP LAPNEVSSSV
201: LLASYAHASI QNGKHASGGG NLSAKIEVEK GLLTLFCSDG TGIQVCDPNG RWYTADNGCG VGDLLLITGK ALSHATAGLR PAASYRTTTD HLSATDTRGR
301: ASLAFRLMPK SNAILDCSPI EAAGHVIPQS YVPVSVSQFM DNLLAENDTL VNPPVKTNVP RDDVCKEPSL RSVLSDPISG AFLEDAMVVS CGHSFGGLML
401: RRVLEMSRCT LCNTEIESGS LVPNHALRAA ASAIKQQDDK RLFHNAAMRR RRKEMSDQMD VENGDPATDD GMHRVVHYPF AVNEKVLIKG NRRTPEKFVG
501: KEAIVTSQCL NGWYLLKIVE SGDNVRLQYR SLKKMVNDDR GGGLQAQPVE SNSL
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GWB1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.