Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G69410.1 | Thale cress | cytosol | 10.34 | 23.42 |
| Bra004379.1-P | Field mustard | cytosol | 9.78 | 22.15 |
| CDY71729 | Canola | cytosol | 9.78 | 22.15 |
| CDX95937 | Canola | cytosol | 9.78 | 22.15 |
| CDY40919 | Canola | cytosol | 9.78 | 22.15 |
| VIT_17s0000g06670.t01 | Wine grape | cytosol | 9.78 | 22.01 |
| AT1G26630.1 | Thale cress | cytosol | 9.78 | 22.01 |
| Bra024702.1-P | Field mustard | cytosol | 9.78 | 22.01 |
| PGSC0003DMT400063132 | Potato | cytosol | 9.5 | 21.38 |
| GSMUA_Achr6P11110_001 | Banana | cytosol | 1.12 | 21.05 |
| Solyc03g115650.2.1 | Tomato | cytosol, extracellular, nucleus | 9.5 | 20.99 |
| PGSC0003DMT400007325 | Potato | cytosol, mitochondrion | 9.22 | 20.75 |
| PGSC0003DMT400068977 | Potato | cytosol | 9.22 | 20.75 |
| Solyc01g011000.2.1 | Tomato | extracellular | 9.22 | 20.75 |
| Solyc04g005510.2.1 | Tomato | cytosol, nucleus, plastid | 9.22 | 20.75 |
| GSMUA_Achr10P... | Banana | cytosol | 8.94 | 20.13 |
| GSMUA_Achr6P16740_001 | Banana | cytosol | 8.94 | 20.13 |
| Solyc05g006890.1.1 | Tomato | cytosol, nucleus | 8.94 | 20.13 |
| GSMUA_Achr3P02260_001 | Banana | cytosol | 10.34 | 18.41 |
| GSMUA_Achr6P23990_001 | Banana | cytosol | 3.63 | 16.05 |
| GSMUA_Achr11P... | Banana | plasma membrane | 9.78 | 15.91 |
| CDY36262 | Canola | cytosol | 5.59 | 12.05 |
| CDX83676 | Canola | cytosol | 5.31 | 10.92 |
| GSMUA_Achr3P18790_001 | Banana | cytosol | 10.89 | 7.4 |
| KRH64023 | Soybean | plastid | 2.79 | 6.99 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P07860_001 | EnsemblPlants:GSMUA_Achr6T07860_001 | EnsemblPlantsGene:GSMUA_Achr6G07860_001 | InterPro:DUF863_pln | PANTHER:PTHR33167 | PANTHER:PTHR33167:SF3 |
| PFAM:PF05904 | UniParc:UPI0002957948 | UniProt:M0T535 | MapMan:35.2 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G07860_001]
Coordinates
chr6:-:5300080..5301547
Molecular Weight (calculated)
40662.8 Da
IEP (calculated)
6.757
GRAVY (calculated)
-0.740
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTKVQCKSY LPGYPISDLH EDANYSWSRF SEDKTFSRQM HNNFKLRGVS SWLDYDKEML KRTMLEHEAI FQRQVFELHR LYRTQKELMH DIKKKHLNEF
101: SGPMVISRSS MFASQMHPEF SESVWHLPHP PLLSTCQSTA NVTDVDDRRN FLNFLEESAT QCNSISAKNG GFVKDDRPKE AKLSRFPRRI LDLHLPADAY
201: IENEDTEHTE GKIDVEPCAM TAETINMIHG IEADNEVKLS LGSVEVPGFG KGALKLNLHS RNGLPTHSFA DLNEPTEDSC ERGTVGSGSC KFNGLNVDSK
301: QLQRPWTTMR SKTSSPHTNP FMDKHGDQVV SSSYLNVDRA DKGQEQQVLH NNCGKING
101: SGPMVISRSS MFASQMHPEF SESVWHLPHP PLLSTCQSTA NVTDVDDRRN FLNFLEESAT QCNSISAKNG GFVKDDRPKE AKLSRFPRRI LDLHLPADAY
201: IENEDTEHTE GKIDVEPCAM TAETINMIHG IEADNEVKLS LGSVEVPGFG KGALKLNLHS RNGLPTHSFA DLNEPTEDSC ERGTVGSGSC KFNGLNVDSK
301: QLQRPWTTMR SKTSSPHTNP FMDKHGDQVV SSSYLNVDRA DKGQEQQVLH NNCGKING
0001: MGTKVHCESL FGGYHHSMGD LNKESNNGCR WPLFYGDNKT SASNNDQCYN NGFTSQTTFG FDKDVVRRTM LEHEAVFKTQ VLELHRVYRT QKDMMDELKR
0101: KQFNKEWVQI EASLSSQATN DDVRKWKIPS FPLANSVYDR PSMSVVEDNG HSPMKGSNSQ GPVSWQNGAS SKSVEVSEVR PTKIRRKMID LCLPADEYID
0201: DNEEVVELKD HRVCSTSSQL PNGDVKTESR IDGVRIGYGS SRSNGLADLN EPVDAQEANE FAYGHSRDLR NGEFQGHIRD YGKSLNSGSV REHIPVIPLQ
0301: PDLNGKPKVW SHQPLRTDHY NGTHKSAAPF FQPAKPLDSL SQPMQVLMNS SQRVMSLPNS GPPSKAVVWR ERTFIDLEAD TDTNSSHEAV IHQNHLDSSL
0401: TSHQQRPLYP YIRPDSAVSW NHLHSSWQNP SFGFPQKVAS AQRYPVLNMS DTLIGNAQKQ GYLGDRLQFE SNSRFDSGCG NSSRLNHNMF YNECSTSSKS
0501: KVAGTGYNYP NGGRSDYSSE RKFVRDLNLN VTLSNTSVVE VRKDEEHLAT LPWLNKPKSV CNSELADGKW SLKSNDAVPS SSLKPLDIRD EAGDKVQNIM
0601: WLERLKSGSC SNNPVTEKID ANKEIPGLAY KDQSNVEKGK VHYVRMLDMN EPCDPLWDED QQTEEQTETR VSASNRCQID LNILGSDDEG ENCSVPASSR
0701: LNSKAPMIDL ETVPESDDEE EDGNISGEKR SEVKSIEEKT LEKPPEFEKL AAETIVAIYS ACLDREVEVV ASSEVSETII LHWFAETVNT HKENLDKKLD
0801: TFSRNQSRSI EDIDYFESMT LQLPDISEQE YMPKPLVPEN LKLEETTGTA LVTSQRPRRG NARKGKQRRD FQRDILPGLL SLSKHEVTED IQMFDGFMRA
0901: TGRSWTPTGL TRKKTGSRGR PRRAITIPAE PVYCPVPAPA PPPPSVQQHV SNQSNNGETE MCLEDRSFAG WGKMTRRPRR QRCPSASTTT ATTSNQRSSS
1001: HAPFT
0101: KQFNKEWVQI EASLSSQATN DDVRKWKIPS FPLANSVYDR PSMSVVEDNG HSPMKGSNSQ GPVSWQNGAS SKSVEVSEVR PTKIRRKMID LCLPADEYID
0201: DNEEVVELKD HRVCSTSSQL PNGDVKTESR IDGVRIGYGS SRSNGLADLN EPVDAQEANE FAYGHSRDLR NGEFQGHIRD YGKSLNSGSV REHIPVIPLQ
0301: PDLNGKPKVW SHQPLRTDHY NGTHKSAAPF FQPAKPLDSL SQPMQVLMNS SQRVMSLPNS GPPSKAVVWR ERTFIDLEAD TDTNSSHEAV IHQNHLDSSL
0401: TSHQQRPLYP YIRPDSAVSW NHLHSSWQNP SFGFPQKVAS AQRYPVLNMS DTLIGNAQKQ GYLGDRLQFE SNSRFDSGCG NSSRLNHNMF YNECSTSSKS
0501: KVAGTGYNYP NGGRSDYSSE RKFVRDLNLN VTLSNTSVVE VRKDEEHLAT LPWLNKPKSV CNSELADGKW SLKSNDAVPS SSLKPLDIRD EAGDKVQNIM
0601: WLERLKSGSC SNNPVTEKID ANKEIPGLAY KDQSNVEKGK VHYVRMLDMN EPCDPLWDED QQTEEQTETR VSASNRCQID LNILGSDDEG ENCSVPASSR
0701: LNSKAPMIDL ETVPESDDEE EDGNISGEKR SEVKSIEEKT LEKPPEFEKL AAETIVAIYS ACLDREVEVV ASSEVSETII LHWFAETVNT HKENLDKKLD
0801: TFSRNQSRSI EDIDYFESMT LQLPDISEQE YMPKPLVPEN LKLEETTGTA LVTSQRPRRG NARKGKQRRD FQRDILPGLL SLSKHEVTED IQMFDGFMRA
0901: TGRSWTPTGL TRKKTGSRGR PRRAITIPAE PVYCPVPAPA PPPPSVQQHV SNQSNNGETE MCLEDRSFAG WGKMTRRPRR QRCPSASTTT ATTSNQRSSS
1001: HAPFT
Arabidopsis Description
F16A14.15 [Source:UniProtKB/TrEMBL;Acc:Q9LMG4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.