Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95937 | Canola | cytosol | 97.47 | 97.47 |
| CDY40919 | Canola | cytosol | 97.47 | 97.47 |
| CDY71729 | Canola | cytosol | 97.47 | 97.47 |
| Bra004379.1-P | Field mustard | cytosol | 96.84 | 96.84 |
| AT1G13950.1 | Thale cress | cytosol | 87.34 | 87.34 |
| AT1G26630.1 | Thale cress | cytosol | 86.08 | 85.53 |
| VIT_17s0000g06670.t01 | Wine grape | cytosol | 86.08 | 85.53 |
| Solyc01g011000.2.1 | Tomato | extracellular | 86.08 | 85.53 |
| PGSC0003DMT400068977 | Potato | cytosol | 86.08 | 85.53 |
| PGSC0003DMT400007325 | Potato | cytosol, mitochondrion | 86.08 | 85.53 |
| TraesCS5A01G104800.1 | Wheat | cytosol | 86.08 | 85.0 |
| Solyc04g005510.2.1 | Tomato | cytosol, nucleus, plastid | 85.44 | 84.91 |
| Os03t0758800-01 | Rice | nucleus, plasma membrane | 86.08 | 84.47 |
| KXG37504 | Sorghum | cytosol | 85.44 | 84.38 |
| Os12t0507200-01 | Rice | plasma membrane, plastid | 85.44 | 84.38 |
| PGSC0003DMT400063132 | Potato | cytosol | 84.81 | 84.28 |
| Solyc03g115650.2.1 | Tomato | cytosol, extracellular, nucleus | 85.44 | 83.33 |
| Os07t0597000-01 | Rice | cytosol, extracellular, plasma membrane | 84.18 | 83.12 |
| Solyc05g006890.1.1 | Tomato | cytosol, nucleus | 83.54 | 83.02 |
| TraesCS2D01G190400.1 | Wheat | cytosol | 82.91 | 81.88 |
| KXG34269 | Sorghum | cytosol | 82.91 | 81.37 |
| KXG36613 | Sorghum | cytosol | 81.65 | 80.62 |
| Os07t0112800-01 | Rice | nucleus | 81.65 | 79.63 |
| TraesCS2D01G261500.1 | Wheat | nucleus | 81.01 | 79.5 |
| TraesCS2A01G262500.1 | Wheat | cytosol | 81.01 | 79.5 |
| TraesCS5D01G116200.2 | Wheat | cytosol | 85.44 | 78.03 |
| HORVU2Hr1G063210.3 | Barley | cytosol | 77.85 | 71.51 |
| HORVU5Hr1G028360.3 | Barley | mitochondrion | 86.71 | 68.5 |
| TraesCS2A01G182600.1 | Wheat | mitochondrion | 68.99 | 62.64 |
| KRH64023 | Soybean | plastid | 15.19 | 16.78 |
| GSMUA_Achr6P07860_001 | Banana | nucleus | 23.42 | 10.34 |
Protein Annotations
| MapMan:17.5.3.1 | Gene3D:2.30.30.30 | Gene3D:2.40.50.140 | EntrezGene:843273 | UniProt:A0A178WLT0 | ProteinID:AAG52496.1 |
| ProteinID:AAG60110.1 | ProteinID:AEE34921.1 | EMBL:AF372933 | ArrayExpress:AT1G69410 | EnsemblPlantsGene:AT1G69410 | RefSeq:AT1G69410 |
| TAIR:AT1G69410 | RefSeq:AT1G69410-TAIR-G | EnsemblPlants:AT1G69410.1 | TAIR:AT1G69410.1 | Symbol:ATELF5A-3 | EMBL:AY060530 |
| EMBL:AY087040 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0003746 |
| GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0006452 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0043022 |
| GO:GO:0045901 | GO:GO:0045905 | InterPro:IF5A-like | InterPro:IPR014722 | InterPro:NA-bd_OB-fold | RefSeq:NP_177100.1 |
| ProteinID:OAP19156.1 | PFAM:PF01287 | PIRSF:PIRSF003025 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | ScanProsite:PS00302 | PANTHER:PTHR11673 | PANTHER:PTHR11673:SF22 | UniProt:Q9C505 | InterPro:Rib_L2_dom2 |
| SMART:SM01376 | SUPFAM:SSF50104 | SUPFAM:SSF50249 | TIGRFAMs:TIGR00037 | InterPro:Trans_elong_IF5A_hypusine_site | InterPro:Transl_elong_IF5A_C |
| InterPro:Translation_prot_SH3-like_sf | UniParc:UPI0000001422 | : | : | : | : |
Description
ELF5A-3Eukaryotic translation initiation factor 5A-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C505]
Coordinates
chr1:+:26089030..26090734
Molecular Weight (calculated)
17208.3 Da
IEP (calculated)
5.816
GRAVY (calculated)
-0.449
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDDEHHFES SDAGASKTYP QQAGNIRKGG HIVIKGRPCK VVEVSTSKTG KHGHAKCHFV AIDIFTSKKL EDIVPSSHNC DVPHVNRVDY QLIDISEDGF
101: VSLLTDNGST KDDLKLPTDE ALLTQLKNGF EEGKDIVVSV MSAMGEEQMC ALKEVGPK
101: VSLLTDNGST KDDLKLPTDE ALLTQLKNGF EEGKDIVVSV MSAMGEEQMC ALKEVGPK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.