Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G108600.1 | Wheat | plastid | 100.0 | 100.0 |
| PGSC0003DMT400007325 | Potato | cytosol, mitochondrion | 96.25 | 96.86 |
| Solyc04g005510.2.1 | Tomato | cytosol, nucleus, plastid | 95.62 | 96.23 |
| Solyc01g011000.2.1 | Tomato | extracellular | 95.62 | 96.23 |
| PGSC0003DMT400068977 | Potato | cytosol | 95.0 | 95.6 |
| Solyc05g006890.1.1 | Tomato | cytosol, nucleus | 93.75 | 94.34 |
| Os12t0507200-01 | Rice | plasma membrane, plastid | 93.12 | 93.12 |
| KRH03532 | Soybean | cytosol | 92.5 | 92.5 |
| KRH54605 | Soybean | cytosol | 92.5 | 92.5 |
| KRH56874 | Soybean | cytosol | 92.5 | 92.5 |
| KRH63282 | Soybean | nucleus | 92.5 | 92.5 |
| KRH72302 | Soybean | cytosol | 91.88 | 91.88 |
| KRH70826 | Soybean | cytosol | 91.25 | 91.82 |
| PGSC0003DMT400063132 | Potato | cytosol | 91.25 | 91.82 |
| AT1G13950.1 | Thale cress | cytosol | 90.62 | 91.77 |
| TraesCS5D01G116200.2 | Wheat | cytosol | 98.75 | 91.33 |
| KRH74954 | Soybean | cytosol | 90.62 | 91.19 |
| VIT_17s0000g06670.t01 | Wine grape | cytosol | 90.62 | 91.19 |
| PGSC0003DMT400028926 | Potato | cytosol | 90.62 | 90.62 |
| Solyc03g115650.2.1 | Tomato | cytosol, extracellular, nucleus | 91.25 | 90.12 |
| Solyc07g005560.2.1 | Tomato | cytosol, nucleus, plastid | 89.38 | 89.38 |
| Solyc12g010060.1.1 | Tomato | nucleus | 88.75 | 88.75 |
| VIT_11s0016g00020.t01 | Wine grape | cytosol | 88.75 | 88.75 |
| PGSC0003DMT400020252 | Potato | cytosol | 88.12 | 88.12 |
| VIT_04s0008g06540.t01 | Wine grape | cytosol | 88.12 | 88.12 |
| CDY40919 | Canola | cytosol | 85.62 | 86.71 |
| CDY71729 | Canola | cytosol | 85.62 | 86.71 |
| Bra004379.1-P | Field mustard | cytosol | 85.62 | 86.71 |
| CDX95937 | Canola | cytosol | 85.62 | 86.71 |
| AT1G69410.1 | Thale cress | cytosol | 85.0 | 86.08 |
| KRH00098 | Soybean | cytosol | 41.88 | 84.81 |
| TraesCS2A01G262500.1 | Wheat | cytosol | 81.25 | 80.75 |
| Bra024702.1-P | Field mustard | cytosol | 80.0 | 80.5 |
| KRH00097 | Soybean | cytosol | 36.88 | 79.73 |
| HORVU5Hr1G028360.3 | Barley | mitochondrion | 99.38 | 79.5 |
| AT1G26630.1 | Thale cress | cytosol | 78.12 | 78.62 |
| CDY13072 | Canola | cytosol | 38.12 | 67.78 |
| TraesCS2A01G182600.1 | Wheat | mitochondrion | 69.38 | 63.79 |
| CDY03674 | Canola | cytosol | 43.12 | 62.73 |
| Bra007992.1-P | Field mustard | plastid | 21.88 | 55.56 |
| KRH03058 | Soybean | vacuole | 73.12 | 29.77 |
| CDY36262 | Canola | cytosol | 30.0 | 28.92 |
| CDX83676 | Canola | cytosol | 30.62 | 28.16 |
| KRH64023 | Soybean | plastid | 16.88 | 18.88 |
Protein Annotations
| MapMan:17.5.3.1 | Gene3D:2.30.30.30 | Gene3D:2.40.50.140 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003746 | GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006452 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0043022 |
| GO:GO:0045901 | GO:GO:0045905 | InterPro:IF5A-like | InterPro:IPR014722 | InterPro:NA-bd_OB-fold | PFAM:PF01287 |
| PIRSF:PIRSF003025 | ScanProsite:PS00302 | PANTHER:PTHR11673 | PANTHER:PTHR11673:SF22 | InterPro:Rib_L2_dom2 | SMART:SM01376 |
| SUPFAM:SSF50104 | SUPFAM:SSF50249 | TIGRFAMs:TIGR00037 | EnsemblPlantsGene:TraesCS5A01G104800 | EnsemblPlants:TraesCS5A01G104800.1 | InterPro:Trans_elong_IF5A_hypusine_site |
| InterPro:Transl_elong_IF5A_C | InterPro:Translation_prot_SH3-like_sf | TIGR:cd04468 | : | : | : |
Description
No Description!
Coordinates
chr5A:+:169185173..169187763
Molecular Weight (calculated)
17474.6 Da
IEP (calculated)
5.580
GRAVY (calculated)
-0.513
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDSEEHQFE SKADAGASKT YPQQAGTIRK NGYIVIKNRP CKVVEVSTSK TGKHGHAKCH FVAIDIFTGK KLEDIVPSSH NCDVPHVNRT EYQLIDISED
101: GFVSLLTDNG NTKDDLKLPT DETLLGQIKD GFAEGKDLVV SVMSAMGEEQ INALKDIGPK
101: GFVSLLTDNG NTKDDLKLPT DETLLGQIKD GFAEGKDLVV SVMSAMGEEQ INALKDIGPK
001: MSDEEHHFES SDAGASKTYP QQAGTIRKNG YIVIKNRPCK VVEVSTSKTG KHGHAKCHFV AIDIFTSKKL EDIVPSSHNC DVPHVNRTDY QLIDISEDGY
101: VSLLTDNGST KDDLKLPNDD TLLQQIKSGF DDGKDLVVSV MSAMGEEQIN ALKDIGPK
101: VSLLTDNGST KDDLKLPNDD TLLQQIKSGF DDGKDLVVSV MSAMGEEQIN ALKDIGPK
Arabidopsis Description
ELF5A-1Eukaryotic translation initiation factor 5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBN7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.