CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03532	Soybean	cytosol	87.84	40.62
KRH54605	Soybean	cytosol	87.84	40.62
KRH56874	Soybean	cytosol	87.84	40.62
KRH63282	Soybean	nucleus	87.84	40.62
KRH72302	Soybean	cytosol	81.08	37.5
VIT_17s0000g06670.t01	Wine grape	cytosol	79.73	37.11
PGSC0003DMT400007325	Potato	cytosol, mitochondrion	79.73	37.11
TraesCS5A01G104800.1	Wheat	cytosol	79.73	36.88
PGSC0003DMT400068977	Potato	cytosol	78.38	36.48
KXG37504	Sorghum	cytosol	78.38	36.25
Solyc01g011000.2.1	Tomato	extracellular	77.03	35.85
Solyc04g005510.2.1	Tomato	cytosol, nucleus, plastid	77.03	35.85
KRH74954	Soybean	cytosol	77.03	35.85
Os12t0507200-01	Rice	plasma membrane, plastid	77.03	35.62
KRH70826	Soybean	cytosol	75.68	35.22
Os07t0597000-01	Rice	cytosol, extracellular, plasma membrane	75.68	35.0
Os03t0758800-01	Rice	nucleus, plasma membrane	75.68	34.78
PGSC0003DMT400063132	Potato	cytosol	74.32	34.59
Solyc05g006890.1.1	Tomato	cytosol, nucleus	72.97	33.96
Solyc03g115650.2.1	Tomato	cytosol, extracellular, nucleus	74.32	33.95
TraesCS5D01G116200.2	Wheat	cytosol	78.38	33.53
KXG36613	Sorghum	cytosol	71.62	33.12
TraesCS2D01G190400.1	Wheat	cytosol	68.92	31.88
Os07t0112800-01	Rice	nucleus	66.22	30.25
KXG34269	Sorghum	cytosol	64.86	29.81
TraesCS2A01G262500.1	Wheat	cytosol	64.86	29.81
TraesCS2D01G261500.1	Wheat	nucleus	64.86	29.81
HORVU5Hr1G028360.3	Barley	mitochondrion	79.73	29.5
HORVU2Hr1G063210.3	Barley	cytosol	64.86	27.91
TraesCS2A01G182600.1	Wheat	mitochondrion	40.54	17.24
KRH03058	Soybean	vacuole	81.08	15.27
KRH64023	Soybean	plastid	24.32	12.59
KRH00098	Soybean	cytosol	2.7	2.53

Protein Annotations

MapMan:17.5.3.1	Gene3D:2.40.50.140	EMBL:ACUP02011379	EnsemblPlantsGene:GLYMA_18G192600	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003746	GO:GO:0005488	GO:GO:0006412	GO:GO:0006452	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538
GO:GO:0043022	GO:GO:0045901	GO:GO:0045905	InterPro:IF5A-like	UniProt:K7MTC1	EnsemblPlants:KRH00097
ProteinID:KRH00097	ProteinID:KRH00097.1	InterPro:NA-bd_OB-fold	PFAM:PF01287	PANTHER:PTHR11673	PANTHER:PTHR11673:SF22
SMART:SM01376	SUPFAM:SSF50249	InterPro:Transl_elong_IF5A_C	UniParc:UPI000294C233	:	:

Description

hypothetical protein

Coordinates

chr18:-:46461597..46462033

Molecular Weight (calculated)

8087.6 Da

IEP (calculated)

4.355

GRAVY (calculated)

-0.342

Length

74 amino acids

Sequence
(BLAST)

1: THHNYQLIDI AEDGFLSLLT KNGNTKDDLK LPTDESLLTQ IKDGFVEGKD LVVSVMSAIG EEQTCALKDI GPKN

Best Arabidopsis Sequence Match ( AT1G69410.1 )
(BLAST)

001: MSDDEHHFES SDAGASKTYP QQAGNIRKGG HIVIKGRPCK VVEVSTSKTG KHGHAKCHFV AIDIFTSKKL EDIVPSSHNC DVPHVNRVDY QLIDISEDGF
101: VSLLTDNGST KDDLKLPTDE ALLTQLKNGF EEGKDIVVSV MSAMGEEQMC ALKEVGPK

Arabidopsis Description

ELF5A-3Eukaryotic translation initiation factor 5A-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C505]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.