Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G261500.1 | Wheat | nucleus | 100.0 | 100.0 |
| TraesCS2B01G279600.1 | Wheat | cytosol | 100.0 | 100.0 |
| HORVU2Hr1G063210.3 | Barley | cytosol | 96.27 | 90.12 |
| PGSC0003DMT400020252 | Potato | cytosol | 83.85 | 84.38 |
| Os07t0112800-01 | Rice | nucleus | 84.47 | 83.95 |
| VIT_11s0016g00020.t01 | Wine grape | cytosol | 83.23 | 83.75 |
| VIT_04s0008g06540.t01 | Wine grape | cytosol | 83.23 | 83.75 |
| Solyc12g010060.1.1 | Tomato | nucleus | 83.23 | 83.75 |
| PGSC0003DMT400063132 | Potato | cytosol | 82.61 | 83.65 |
| VIT_17s0000g06670.t01 | Wine grape | cytosol | 81.99 | 83.02 |
| Solyc03g115650.2.1 | Tomato | cytosol, extracellular, nucleus | 83.23 | 82.72 |
| Zm00001d007940_P002 | Maize | cytosol, extracellular | 81.99 | 82.5 |
| PGSC0003DMT400028926 | Potato | cytosol | 81.99 | 82.5 |
| AT1G26630.1 | Thale cress | cytosol | 81.37 | 82.39 |
| Solyc07g005560.2.1 | Tomato | cytosol, nucleus, plastid | 81.37 | 81.88 |
| PGSC0003DMT400068977 | Potato | cytosol | 80.75 | 81.76 |
| PGSC0003DMT400007325 | Potato | cytosol, mitochondrion | 80.75 | 81.76 |
| KRH70826 | Soybean | cytosol | 80.75 | 81.76 |
| AT1G13950.1 | Thale cress | cytosol | 80.12 | 81.65 |
| KRH63282 | Soybean | nucleus | 80.75 | 81.25 |
| KRH54605 | Soybean | cytosol | 80.75 | 81.25 |
| KRH72302 | Soybean | cytosol | 80.75 | 81.25 |
| KRH03532 | Soybean | cytosol | 80.75 | 81.25 |
| KRH56874 | Soybean | cytosol | 80.75 | 81.25 |
| TraesCS5A01G104800.1 | Wheat | cytosol | 80.75 | 81.25 |
| KRH74954 | Soybean | cytosol | 80.12 | 81.13 |
| Bra024702.1-P | Field mustard | cytosol | 80.12 | 81.13 |
| Solyc04g005510.2.1 | Tomato | cytosol, nucleus, plastid | 80.12 | 81.13 |
| AT1G69410.1 | Thale cress | cytosol | 79.5 | 81.01 |
| KXG34269 | Sorghum | cytosol | 80.75 | 80.75 |
| Solyc05g006890.1.1 | Tomato | cytosol, nucleus | 79.5 | 80.5 |
| Solyc01g011000.2.1 | Tomato | extracellular | 79.5 | 80.5 |
| Bra004379.1-P | Field mustard | cytosol | 78.26 | 79.75 |
| CDY40919 | Canola | cytosol | 77.64 | 79.11 |
| CDX95937 | Canola | cytosol | 77.64 | 79.11 |
| CDY71729 | Canola | cytosol | 77.64 | 79.11 |
| KRH00098 | Soybean | cytosol | 37.27 | 75.95 |
| KRH00097 | Soybean | cytosol | 29.81 | 64.86 |
| CDY13072 | Canola | cytosol | 36.02 | 64.44 |
| TraesCS2A01G182600.1 | Wheat | mitochondrion | 66.46 | 61.49 |
| CDY03674 | Canola | cytosol | 41.61 | 60.91 |
| Bra007992.1-P | Field mustard | plastid | 21.12 | 53.97 |
| CDY36262 | Canola | cytosol | 29.19 | 28.31 |
| CDX83676 | Canola | cytosol | 29.19 | 27.01 |
| KRH03058 | Soybean | vacuole | 63.98 | 26.21 |
| KRH64023 | Soybean | plastid | 14.29 | 16.08 |
Protein Annotations
| MapMan:17.5.3.1 | Gene3D:2.30.30.30 | Gene3D:2.40.50.140 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003746 | GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006452 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0043022 |
| GO:GO:0045901 | GO:GO:0045905 | InterPro:IF5A-like | InterPro:IPR014722 | InterPro:NA-bd_OB-fold | PFAM:PF01287 |
| PIRSF:PIRSF003025 | ScanProsite:PS00302 | PANTHER:PTHR11673 | PANTHER:PTHR11673:SF22 | InterPro:Rib_L2_dom2 | SMART:SM01376 |
| SUPFAM:SSF50104 | SUPFAM:SSF50249 | TIGRFAMs:TIGR00037 | EnsemblPlantsGene:TraesCS2A01G262500 | EnsemblPlants:TraesCS2A01G262500.1 | InterPro:Trans_elong_IF5A_hypusine_site |
| InterPro:Transl_elong_IF5A_C | InterPro:Translation_prot_SH3-like_sf | TIGR:cd04468 | : | : | : |
Description
No Description!
Coordinates
chr2A:+:414499593..414501063
Molecular Weight (calculated)
17363.5 Da
IEP (calculated)
6.074
GRAVY (calculated)
-0.419
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDTDEHHFE SKADSGASKT YPQQAGAIRK GGHIVIKARP CKVVEVSTSK TGKHGHAKCH FVAIDIFNGK KLEDIVPSSH NCDVPHVDRQ DYQLIDITDD
101: GYVSLLTESG NTKDDLKLPT DDVLLGQIKT GFADGKDLIL SVMSAMGEEQ ICAVKEIGGG K
101: GYVSLLTESG NTKDDLKLPT DDVLLGQIKT GFADGKDLIL SVMSAMGEEQ ICAVKEIGGG K
001: MSDDEHHFEA SESGASKTYP QSAGNIRKGG HIVIKNRPCK VVEVSTSKTG KHGHAKCHFV AIDIFTAKKL EDIVPSSHNC DVPHVNRVDY QLIDITEDGF
101: VSLLTDSGGT KDDLKLPTDD GLTAQMRLGF DEGKDIVVSV MSSMGEEQIC AVKEVGGGK
101: VSLLTDSGGT KDDLKLPTDD GLTAQMRLGF DEGKDIVVSV MSSMGEEQIC AVKEVGGGK
Arabidopsis Description
ELF5A-2Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VP3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.