Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g06670.t01 | Wine grape | cytosol | 95.0 | 95.6 |
| Os12t0507200-01 | Rice | plasma membrane, plastid | 93.75 | 93.75 |
| VIT_04s0008g06540.t01 | Wine grape | cytosol | 93.12 | 93.12 |
| Os07t0597000-01 | Rice | cytosol, extracellular, plasma membrane | 92.5 | 92.5 |
| KRH72302 | Soybean | cytosol | 91.88 | 91.88 |
| GSMUA_Achr6P16740_001 | Banana | cytosol | 91.25 | 91.82 |
| GSMUA_Achr10P... | Banana | cytosol | 90.62 | 91.19 |
| PGSC0003DMT400028926 | Potato | cytosol | 90.62 | 90.62 |
| Os03t0758800-01 | Rice | nucleus, plasma membrane | 90.62 | 90.06 |
| Solyc12g010060.1.1 | Tomato | nucleus | 90.0 | 90.0 |
| Solyc07g005560.2.1 | Tomato | cytosol, nucleus, plastid | 90.0 | 90.0 |
| PGSC0003DMT400020252 | Potato | cytosol | 90.0 | 90.0 |
| KXG37504 | Sorghum | cytosol | 89.38 | 89.38 |
| TraesCS5A01G104800.1 | Wheat | cytosol | 88.75 | 88.75 |
| Os07t0112800-01 | Rice | nucleus | 88.75 | 87.65 |
| KXG36613 | Sorghum | cytosol | 87.5 | 87.5 |
| KXG34269 | Sorghum | cytosol | 84.38 | 83.85 |
| TraesCS2A01G262500.1 | Wheat | cytosol | 83.75 | 83.23 |
| TraesCS2D01G261500.1 | Wheat | nucleus | 83.75 | 83.23 |
| TraesCS2D01G190400.1 | Wheat | cytosol | 83.12 | 83.12 |
| TraesCS5D01G116200.2 | Wheat | cytosol | 88.12 | 81.5 |
| GSMUA_Achr3P02260_001 | Banana | cytosol | 93.75 | 74.63 |
| HORVU2Hr1G063210.3 | Barley | cytosol | 80.0 | 74.42 |
| GSMUA_Achr6P23990_001 | Banana | cytosol | 37.5 | 74.07 |
| HORVU5Hr1G028360.3 | Barley | mitochondrion | 88.12 | 70.5 |
| GSMUA_Achr11P... | Banana | plasma membrane | 92.5 | 67.27 |
| TraesCS2A01G182600.1 | Wheat | mitochondrion | 68.12 | 62.64 |
| TraesCS6B01G411200.1 | Wheat | mitochondrion | 64.38 | 60.23 |
| Zm00001d013648_P001 | Maize | plastid | 53.75 | 37.72 |
| GSMUA_Achr3P18790_001 | Banana | cytosol | 90.0 | 27.32 |
Protein Annotations
| EntrezGene:100267006 | wikigene:100267006 | EntrezGene:100853490 | wikigene:100853490 | MapMan:17.5.3.1 | Gene3D:2.30.30.30 |
| Gene3D:2.40.50.140 | UniProt:A5BZP4 | EMBL:AM477000 | ProteinID:CAN70753 | ProteinID:CAN70753.1 | ProteinID:CBI40934 |
| ProteinID:CBI40934.3 | EMBL:FN596770 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003746 |
| GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006452 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0043022 | GO:GO:0045901 |
| GO:GO:0045905 | InterPro:IF5A-like | InterPro:IPR014722 | EntrezGene:LOC100267006 | wikigene:LOC100267006 | EntrezGene:LOC100853490 |
| wikigene:LOC100853490 | InterPro:NA-bd_OB-fold | PFAM:PF01287 | PIRSF:PIRSF003025 | ScanProsite:PS00302 | PANTHER:PTHR11673 |
| PANTHER:PTHR11673:SF22 | InterPro:Rib_L2_dom2 | SMART:SM01376 | SUPFAM:SSF50104 | SUPFAM:SSF50249 | TIGR:TC59373 |
| TIGRFAMs:TIGR00037 | InterPro:Trans_elong_IF5A_hypusine_site | InterPro:Transl_elong_IF5A_C | InterPro:Translation_prot_SH3-like_sf | UniParc:UPI000152215D | ArrayExpress:VIT_11s0016g00020 |
| EnsemblPlantsGene:VIT_11s0016g00020 | EnsemblPlants:VIT_11s0016g00020.t01 | RefSeq:XP_002273265 | RefSeq:XP_002273265.1 | RefSeq:XP_003635375.2 | : |
Description
Eukaryotic translation initiation factor 5A [Source:UniProtKB/TrEMBL;Acc:A5BZP4]
Coordinates
chr11_random:-:8920..11971
Molecular Weight (calculated)
17468.6 Da
IEP (calculated)
5.863
GRAVY (calculated)
-0.496
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDEEHHFDS KADAGASKTY PQQAGAIRKN GYIVIKARPC KVVEVSTSKT GKHGHAKCHF VGIDIFNGKK LEDIVPSSHN CDVPHVNRTD YQLIDISEDG
101: FVSLLTENGN TKDDLRLPTD DNLLSQIKDG FADGKDLVVT VMSAMGEEQI CALKDIGPKN
101: FVSLLTENGN TKDDLRLPTD DNLLSQIKDG FADGKDLVVT VMSAMGEEQI CALKDIGPKN
001: MSDEEHHFES SDAGASKTYP QQAGTIRKNG YIVIKNRPCK VVEVSTSKTG KHGHAKCHFV AIDIFTSKKL EDIVPSSHNC DVPHVNRTDY QLIDISEDGY
101: VSLLTDNGST KDDLKLPNDD TLLQQIKSGF DDGKDLVVSV MSAMGEEQIN ALKDIGPK
101: VSLLTDNGST KDDLKLPNDD TLLQQIKSGF DDGKDLVVSV MSAMGEEQIN ALKDIGPK
Arabidopsis Description
ELF5A-1Eukaryotic translation initiation factor 5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBN7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.