Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d007940_P002 | Maize | cytosol, extracellular | 90.06 | 90.62 |
| Os07t0112800-01 | Rice | nucleus | 89.44 | 88.89 |
| KRH00098 | Soybean | cytosol | 42.86 | 87.34 |
| KXG37504 | Sorghum | cytosol | 85.71 | 86.25 |
| KRH74954 | Soybean | cytosol | 85.09 | 86.16 |
| PGSC0003DMT400020252 | Potato | cytosol | 85.09 | 85.62 |
| KRH63282 | Soybean | nucleus | 85.09 | 85.62 |
| KRH56874 | Soybean | cytosol | 85.09 | 85.62 |
| KRH54605 | Soybean | cytosol | 85.09 | 85.62 |
| KRH03532 | Soybean | cytosol | 85.09 | 85.62 |
| VIT_17s0000g06670.t01 | Wine grape | cytosol | 84.47 | 85.53 |
| KRH70826 | Soybean | cytosol | 84.47 | 85.53 |
| KRH72302 | Soybean | cytosol | 84.47 | 85.0 |
| Solyc12g010060.1.1 | Tomato | nucleus | 84.47 | 85.0 |
| PGSC0003DMT400028926 | Potato | cytosol | 84.47 | 85.0 |
| PGSC0003DMT400063132 | Potato | cytosol | 83.85 | 84.91 |
| VIT_11s0016g00020.t01 | Wine grape | cytosol | 83.85 | 84.38 |
| Solyc07g005560.2.1 | Tomato | cytosol, nucleus, plastid | 83.85 | 84.38 |
| PGSC0003DMT400007325 | Potato | cytosol, mitochondrion | 83.23 | 84.28 |
| CDY71729 | Canola | cytosol | 82.61 | 84.18 |
| CDY40919 | Canola | cytosol | 82.61 | 84.18 |
| AT1G13950.1 | Thale cress | cytosol | 82.61 | 84.18 |
| CDX95937 | Canola | cytosol | 82.61 | 84.18 |
| VIT_04s0008g06540.t01 | Wine grape | cytosol | 83.23 | 83.75 |
| KXG36613 | Sorghum | cytosol | 83.23 | 83.75 |
| Solyc04g005510.2.1 | Tomato | cytosol, nucleus, plastid | 82.61 | 83.65 |
| Solyc01g011000.2.1 | Tomato | extracellular | 82.61 | 83.65 |
| Bra004379.1-P | Field mustard | cytosol | 81.99 | 83.54 |
| Solyc03g115650.2.1 | Tomato | cytosol, extracellular, nucleus | 83.85 | 83.33 |
| Solyc05g006890.1.1 | Tomato | cytosol, nucleus | 81.99 | 83.02 |
| PGSC0003DMT400068977 | Potato | cytosol | 81.99 | 83.02 |
| AT1G69410.1 | Thale cress | cytosol | 81.37 | 82.91 |
| Bra024702.1-P | Field mustard | cytosol | 80.12 | 81.13 |
| TraesCS2A01G262500.1 | Wheat | cytosol | 80.75 | 80.75 |
| TraesCS2B01G279600.1 | Wheat | cytosol | 80.75 | 80.75 |
| TraesCS2D01G261500.1 | Wheat | nucleus | 80.75 | 80.75 |
| AT1G26630.1 | Thale cress | cytosol | 79.5 | 80.5 |
| HORVU2Hr1G063210.3 | Barley | cytosol | 77.64 | 72.67 |
| CDY13072 | Canola | cytosol | 37.27 | 66.67 |
| KRH00097 | Soybean | cytosol | 29.81 | 64.86 |
| CDY03674 | Canola | cytosol | 40.37 | 59.09 |
| Bra007992.1-P | Field mustard | plastid | 22.98 | 58.73 |
| CDY36262 | Canola | cytosol | 29.81 | 28.92 |
| CDX83676 | Canola | cytosol | 29.81 | 27.59 |
| KRH03058 | Soybean | vacuole | 63.35 | 25.95 |
| KRH64023 | Soybean | plastid | 14.29 | 16.08 |
Protein Annotations
| MapMan:17.5.3.1 | Gene3D:2.30.30.30 | Gene3D:2.40.50.140 | UniProt:A0A1B6Q8L9 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003746 | GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006452 | GO:GO:0008135 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 |
| GO:GO:0043022 | GO:GO:0045901 | GO:GO:0045905 | InterPro:IF5A-like | InterPro:IPR014722 | EnsemblPlants:KXG34269 |
| ProteinID:KXG34269 | ProteinID:KXG34269.1 | ProteinID:KXG34270.1 | InterPro:NA-bd_OB-fold | PFAM:PF01287 | PIRSF:PIRSF003025 |
| ScanProsite:PS00302 | PANTHER:PTHR11673 | PANTHER:PTHR11673:SF22 | InterPro:Rib_L2_dom2 | SMART:SM01376 | EnsemblPlantsGene:SORBI_3002G007100 |
| SUPFAM:SSF50104 | SUPFAM:SSF50249 | TIGRFAMs:TIGR00037 | InterPro:Trans_elong_IF5A_hypusine_site | InterPro:Transl_elong_IF5A_C | InterPro:Translation_prot_SH3-like_sf |
| UniParc:UPI00016EF3F4 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:677209..679825
Molecular Weight (calculated)
17564.7 Da
IEP (calculated)
5.873
GRAVY (calculated)
-0.535
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDSEEHHFE SKADAGASKT YPQQAGTIRK NGYIVIKNRP CKVVEVSTSK TGKHGHAKCH FVGIDIFTGK KLEDIVPSSH NCDVPHVNRV EYQLIDISED
101: GFVSLLTESG NTKDDTKLPS DEALQAQIKS GYDEGKDILL TVMSAMGEEQ ICAVKEIGGK N
101: GFVSLLTESG NTKDDTKLPS DEALQAQIKS GYDEGKDILL TVMSAMGEEQ ICAVKEIGGK N
001: MSDEEHHFES SDAGASKTYP QQAGTIRKNG YIVIKNRPCK VVEVSTSKTG KHGHAKCHFV AIDIFTSKKL EDIVPSSHNC DVPHVNRTDY QLIDISEDGY
101: VSLLTDNGST KDDLKLPNDD TLLQQIKSGF DDGKDLVVSV MSAMGEEQIN ALKDIGPK
101: VSLLTDNGST KDDLKLPNDD TLLQQIKSGF DDGKDLVVSV MSAMGEEQIN ALKDIGPK
Arabidopsis Description
ELF5A-1Eukaryotic translation initiation factor 5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBN7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.