CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00097	Soybean	cytosol	15.27	81.08
KRH72302	Soybean	cytosol	30.53	75.0
TraesCS5A01G104800.1	Wheat	cytosol	29.77	73.12
KRH03532	Soybean	cytosol	29.26	71.88
KRH54605	Soybean	cytosol	29.26	71.88
KRH56874	Soybean	cytosol	29.26	71.88
KRH63282	Soybean	nucleus	29.26	71.88
KRH70826	Soybean	cytosol	28.75	71.07
Os03t0758800-01	Rice	nucleus, plasma membrane	29.01	70.81
KXG37504	Sorghum	cytosol	28.75	70.62
Os12t0507200-01	Rice	plasma membrane, plastid	28.5	70.0
KRH74954	Soybean	cytosol	28.24	69.81
Os07t0597000-01	Rice	cytosol, extracellular, plasma membrane	28.24	69.38
KXG36613	Sorghum	cytosol	27.74	68.12
TraesCS5D01G116200.2	Wheat	cytosol	29.52	67.05
TraesCS2D01G190400.1	Wheat	cytosol	26.46	65.0
Os07t0112800-01	Rice	nucleus	26.46	64.2
TraesCS2A01G262500.1	Wheat	cytosol	26.21	63.98
TraesCS2D01G261500.1	Wheat	nucleus	26.21	63.98
KXG34269	Sorghum	cytosol	25.95	63.35
GSMUA_Achr6P23990_001	Banana	cytosol	12.98	62.96
HORVU2Hr1G063210.3	Barley	cytosol	26.21	59.88
HORVU5Hr1G028360.3	Barley	mitochondrion	30.03	59.0
TraesCS6B01G411200.1	Wheat	mitochondrion	24.43	56.14
KRH00098	Soybean	cytosol	9.92	49.37
TraesCS2A01G182600.1	Wheat	mitochondrion	20.87	47.13
Zm00001d013648_P001	Maize	plastid	22.14	38.16
KRH64023	Soybean	plastid	7.38	20.28

Protein Annotations

EntrezGene:100797738	MapMan:17.5.3.1	Gene3D:2.30.30.30	Gene3D:2.40.50.140	Gene3D:3.80.10.10	UniProt:A0A0R0FIA7
EMBL:ACUP02010335	EnsemblPlantsGene:GLYMA_17G074100	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746
GO:GO:0005488	GO:GO:0005515	GO:GO:0006412	GO:GO:0006452	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0043022
GO:GO:0045901	GO:GO:0045905	InterPro:IF5A-like	InterPro:IPR001611	InterPro:IPR014722	InterPro:IPR032675
EnsemblPlants:KRH03058	ProteinID:KRH03058	ProteinID:KRH03058.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
InterPro:NA-bd_OB-fold	PFAM:PF01287	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00302	PFscan:PS51450
PANTHER:PTHR44913	InterPro:Rib_L2_dom2	SMART:SM00369	SMART:SM01376	SUPFAM:SSF50104	SUPFAM:SSF50249
SUPFAM:SSF52058	SignalP:SignalP-noTM	TIGRFAMs:TIGR00037	InterPro:Trans_elong_IF5A_hypusine_site	InterPro:Transl_elong_IF5A_C	InterPro:Translation_prot_SH3-like_sf
UniParc:UPI0006EDDD01	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:5794706..5800789

Molecular Weight (calculated)

42492.5 Da

IEP (calculated)

5.194

GRAVY (calculated)

-0.059

Length

393 amino acids

Sequence
(BLAST)

001: MGLGVFGSVL VLALLFKHLA SQQPNTDEFF VSEFLKKMMG LASSQGYNFS ASVCSWKGVS CDANREHVVD LVFSGMDLSG TIPDNTIGKL GKLQSLDLSH
101: NKITDLPSDF WSLSTVKSLN LSSNQISGSL TNNIGNFGLL ESIDLSSNNF SEEIPEAVSS LLSLRVLKLD QNRFAHNIPS GILKCQSLVS IDVSSNQLNG
201: TLPEGFGAAF PKLRVLNLSG NNMYGHISDI SGLKSIVNLN ISGNSFQGSI VDLFQGRLEV LDLSRNQFQG HIPQVVEVST SKTGKHGHAK CHFVAIDIFN
301: GKKLEDIVPS SHNCDVPHVN RTDYQLIDIS EDGFVSLLTD NGNTKDDLKL PTDEALLSQI KDGFAEGKDL VVSVMSAMGE EQICSLKDIG PKN

Best Arabidopsis Sequence Match ( AT1G13950.1 )
(BLAST)

001: MSDEEHHFES SDAGASKTYP QQAGTIRKNG YIVIKNRPCK VVEVSTSKTG KHGHAKCHFV AIDIFTSKKL EDIVPSSHNC DVPHVNRTDY QLIDISEDGY
101: VSLLTDNGST KDDLKLPNDD TLLQQIKSGF DDGKDLVVSV MSAMGEEQIN ALKDIGPK

Arabidopsis Description

ELF5A-1Eukaryotic translation initiation factor 5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBN7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.