Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024702.1-P | Field mustard | cytosol | 89.94 | 89.94 |
| AT1G69410.1 | Thale cress | cytosol | 85.53 | 86.08 |
| TraesCS2D01G261500.1 | Wheat | nucleus | 82.39 | 81.37 |
| TraesCS2A01G262500.1 | Wheat | cytosol | 82.39 | 81.37 |
| AT1G13950.1 | Thale cress | cytosol | 80.5 | 81.01 |
| PGSC0003DMT400063132 | Potato | cytosol | 79.87 | 79.87 |
| KXG34269 | Sorghum | cytosol | 80.5 | 79.5 |
| Os12t0507200-01 | Rice | plasma membrane, plastid | 79.87 | 79.38 |
| Solyc03g115650.2.1 | Tomato | cytosol, extracellular, nucleus | 80.5 | 79.01 |
| KXG37504 | Sorghum | cytosol | 79.25 | 78.75 |
| Os07t0597000-01 | Rice | cytosol, extracellular, plasma membrane | 79.25 | 78.75 |
| VIT_17s0000g06670.t01 | Wine grape | cytosol | 78.62 | 78.62 |
| PGSC0003DMT400068977 | Potato | cytosol | 78.62 | 78.62 |
| Os03t0758800-01 | Rice | nucleus, plasma membrane | 79.25 | 78.26 |
| TraesCS5A01G104800.1 | Wheat | cytosol | 78.62 | 78.12 |
| Solyc05g006890.1.1 | Tomato | cytosol, nucleus | 77.99 | 77.99 |
| PGSC0003DMT400007325 | Potato | cytosol, mitochondrion | 77.99 | 77.99 |
| Os07t0112800-01 | Rice | nucleus | 79.25 | 77.78 |
| Solyc01g011000.2.1 | Tomato | extracellular | 77.36 | 77.36 |
| Solyc04g005510.2.1 | Tomato | cytosol, nucleus, plastid | 77.36 | 77.36 |
| TraesCS2D01G190400.1 | Wheat | cytosol | 76.1 | 75.62 |
| KXG36613 | Sorghum | cytosol | 74.84 | 74.38 |
| HORVU2Hr1G063210.3 | Barley | cytosol | 79.25 | 73.26 |
| TraesCS5D01G116200.2 | Wheat | cytosol | 78.62 | 72.25 |
| HORVU5Hr1G028360.3 | Barley | mitochondrion | 78.62 | 62.5 |
| TraesCS2A01G182600.1 | Wheat | mitochondrion | 62.89 | 57.47 |
| CDY36262 | Canola | cytosol | 30.82 | 29.52 |
| CDX83676 | Canola | cytosol | 31.45 | 28.74 |
| KRH64023 | Soybean | plastid | 14.47 | 16.08 |
| GSMUA_Achr6P07860_001 | Banana | nucleus | 22.01 | 9.78 |
Protein Annotations
| MapMan:17.5.3.1 | Gene3D:2.30.30.30 | Gene3D:2.40.50.140 | PDB:3HKS | EntrezGene:839203 | UniProt:A0A178WC68 |
| ProteinID:AAF87023.1 | ProteinID:AEE30711.1 | ProteinID:AEE30712.1 | EMBL:AF492850 | ArrayExpress:AT1G26630 | EnsemblPlantsGene:AT1G26630 |
| RefSeq:AT1G26630 | TAIR:AT1G26630 | RefSeq:AT1G26630-TAIR-G | EnsemblPlants:AT1G26630.1 | TAIR:AT1G26630.1 | EMBL:AY039588 |
| EMBL:AY055789 | EMBL:AY084827 | Unigene:At.21018 | Symbol:FBR12 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003743 | GO:GO:0003746 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0006452 |
| GO:GO:0006950 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008219 | GO:GO:0009058 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009611 | GO:GO:0009617 | GO:GO:0009987 | GO:GO:0012501 |
| GO:GO:0016043 | GO:GO:0019538 | GO:GO:0034050 | GO:GO:0042742 | GO:GO:0043022 | GO:GO:0045901 |
| GO:GO:0045905 | GO:GO:0046686 | InterPro:IF5A-like | InterPro:IPR014722 | InterPro:NA-bd_OB-fold | RefSeq:NP_001077597.1 |
| RefSeq:NP_173985.1 | ProteinID:OAP14973.1 | PFAM:PF01287 | PIRSF:PIRSF003025 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000282 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00302 | PANTHER:PTHR11673 |
| PANTHER:PTHR11673:SF22 | UniProt:Q93VP3 | InterPro:Rib_L2_dom2 | SMART:SM01376 | SUPFAM:SSF50104 | SUPFAM:SSF50249 |
| TIGRFAMs:TIGR00037 | InterPro:Trans_elong_IF5A_hypusine_site | InterPro:Transl_elong_IF5A_C | InterPro:Translation_prot_SH3-like_sf | UniParc:UPI000000110A | : |
Description
ELF5A-2Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VP3]
Coordinates
chr1:+:9205800..9207417
Molecular Weight (calculated)
17141.2 Da
IEP (calculated)
5.814
GRAVY (calculated)
-0.401
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDDEHHFEA SESGASKTYP QSAGNIRKGG HIVIKNRPCK VVEVSTSKTG KHGHAKCHFV AIDIFTAKKL EDIVPSSHNC DVPHVNRVDY QLIDITEDGF
101: VSLLTDSGGT KDDLKLPTDD GLTAQMRLGF DEGKDIVVSV MSSMGEEQIC AVKEVGGGK
101: VSLLTDSGGT KDDLKLPTDD GLTAQMRLGF DEGKDIVVSV MSSMGEEQIC AVKEVGGGK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.