Factsheet for HORVU1Hr1G062590.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

cytosol 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, extracellular, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G049290.1	Barley	cytosol, extracellular, plastid	94.66	94.66
HORVU2Hr1G020530.1	Barley	extracellular	89.31	89.31
Os01t0122701-00	Rice	plastid	31.3	40.59
TraesCS3D01G055600.1	Wheat	cytosol, nucleus, peroxisome	80.92	33.44
HORVU3Hr1G005450.2	Barley	endoplasmic reticulum, nucleus, peroxisome	54.96	23.08
HORVU3Hr1G005380.1	Barley	cytosol, nucleus, plastid	48.85	19.39
EES00397	Sorghum	plastid	41.98	17.08
HORVU3Hr1G005290.2	Barley	plastid	48.09	16.84
HORVU4Hr1G069550.1	Barley	plastid	23.66	15.9
HORVU3Hr1G005430.1	Barley	plastid	27.48	14.29
HORVU4Hr1G016950.1	Barley	plastid	28.24	12.09
HORVU7Hr1G101970.2	Barley	cytosol, endoplasmic reticulum, nucleus	29.01	12.06
HORVU6Hr1G082920.1	Barley	plastid	31.3	10.71
HORVU3Hr1G005470.1	Barley	plastid	23.66	9.75
HORVU3Hr1G012260.1	Barley	cytosol, nucleus	25.95	9.44
HORVU6Hr1G082930.1	Barley	cytosol, mitochondrion, nucleus, plastid	21.37	7.95
HORVU3Hr1G005410.9	Barley	mitochondrion	43.51	7.59
HORVU1Hr1G023820.1	Barley	extracellular	10.69	7.57
HORVU3Hr1G005400.7	Barley	plasma membrane, plastid	40.46	5.08

Protein Annotations

EnsemblPlants:HORVU1Hr1G062590.3	EnsemblPlantsGene:HORVU1Hr1G062590	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006511	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	InterPro:SINA-like	PANTHER:PTHR10315	PANTHER:PTHR10315:SF46
SEG:seg	TMHMM:TMhelix	UniParc:UPI000B4786B3	UniProt:A0A287FX01	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr1H:-:450929462..450929854

Molecular Weight (calculated)

13859.2 Da

IEP (calculated)

9.944

GRAVY (calculated)

0.349

Length

131 amino acids

Sequence
(BLAST)

001: MPVHRVQYGK VLVLQVPATL EPRGLLLGDE DGRTFLIVVG ALGAGAAVSA VCVRAEAVVW PRYTLKVWAS KPAPAPNRKC KADTIMAEIE VTSSTAPSAV
101: AVEELAYLAV PPKLLVGAGA SRRMSLKIRI D

Best Arabidopsis Sequence Match ( AT3G22770.1 )
(BLAST)

001: MVVMMMNFRV YLMRVNLDNN VVESSSSSSS SCIKREAKVI SLGDEVDDIS QVFHCDGLLL CISITQAKTR LVVWNPYWGH TRSIEPTHQF NKFDSYSYAL
101: GYDKSSKSHK ILRCITCLRP HFHEFIIYDF NSNSWRVFHV TPDWQLGTIN SGVSLKGNAF WVAEEKYYET SETNEEFFLL SFDFTRETFG PLLPLPFQFV
201: ESEDALSVSN VRDEQLAVLY QPWDTLMMEI WVTSKIEPNA VSWNSKVFLS VSIRKLIGPQ FQFCLGSFFI DEEKKVAVVF DKGYRIQRYI AYIIGVDGSM
301: KEVDLGESDR RCYPIVWSYV PSLVQLN

Arabidopsis Description

F-box associated ubiquitination effector family protein [Source:UniProtKB/TrEMBL;Acc:Q9LUI4]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.