Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0122701-00 | Rice | plastid | 13.66 | 43.56 |
| HORVU7Hr1G049290.1 | Barley | cytosol, extracellular, plastid | 17.7 | 43.51 |
| HORVU1Hr1G062590.3 | Barley | cytosol, extracellular, plastid | 17.08 | 41.98 |
| KXG32025 | Sorghum | cytosol | 39.75 | 41.03 |
| TraesCS3D01G015700.1 | Wheat | cytosol, nucleus, peroxisome | 41.3 | 40.92 |
| OQU86430 | Sorghum | cytosol, nucleus, plastid | 33.23 | 40.53 |
| TraesCSU01G044900.1 | Wheat | cytosol, nucleus, peroxisome | 41.3 | 40.06 |
| HORVU2Hr1G020530.1 | Barley | extracellular | 16.15 | 39.69 |
| TraesCS3B01G079000.1 | Wheat | cytosol, nucleus, plastid | 38.2 | 39.55 |
| TraesCS3D01G066100.1 | Wheat | cytosol, nucleus, plastid | 38.2 | 39.3 |
| TraesCS3B01G028800.1 | Wheat | cytosol, nucleus, peroxisome | 40.37 | 39.04 |
| TraesCS7B01G147600.1 | Wheat | plastid | 27.64 | 39.04 |
| TraesCS3A01G031400.1 | Wheat | cytosol, nucleus, peroxisome | 39.75 | 39.02 |
| TraesCS3A01G030000.1 | Wheat | nucleus, plasma membrane, plastid | 39.75 | 38.67 |
| TraesCS3B01G054300.1 | Wheat | nucleus, peroxisome, plastid | 39.44 | 38.6 |
| TraesCS3D01G028400.1 | Wheat | nucleus, plasma membrane, plastid | 38.82 | 38.58 |
| EES00400 | Sorghum | cytosol | 38.82 | 38.11 |
| TraesCS3A01G065700.1 | Wheat | cytosol, nucleus, plastid | 39.13 | 38.07 |
| TraesCS3D01G066200.1 | Wheat | cytosol, nucleus, plastid | 38.2 | 37.61 |
| TraesCS3B01G030800.1 | Wheat | nucleus, plasma membrane, plastid | 34.16 | 37.54 |
| TraesCS5A01G435500.1 | Wheat | cytosol, nucleus, plastid | 34.47 | 37.5 |
| TraesCS3B01G079100.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 37.58 | 37.23 |
| TraesCS3D01G028300.1 | Wheat | nucleus, peroxisome, plastid | 37.58 | 37.12 |
| TraesCS3D01G016100.1 | Wheat | nucleus, peroxisome, plastid | 37.58 | 37.0 |
| HORVU3Hr1G005380.1 | Barley | cytosol, nucleus, plastid | 37.89 | 36.97 |
| TraesCS3D01G055600.1 | Wheat | cytosol, nucleus, peroxisome | 36.34 | 36.91 |
| TraesCS3D01G016900.1 | Wheat | nucleus, plasma membrane, plastid | 34.16 | 36.67 |
| TraesCS3A01G029500.1 | Wheat | cytosol, nucleus, peroxisome | 37.58 | 36.67 |
| TraesCS3B01G030900.1 | Wheat | cytosol, nucleus, plasma membrane | 36.34 | 36.45 |
| TraesCSU01G046200.1 | Wheat | nucleus, plasma membrane, plastid | 34.16 | 36.3 |
| TraesCS3B01G028400.1 | Wheat | nucleus, peroxisome, plastid | 37.89 | 36.2 |
| TraesCSU01G045700.1 | Wheat | nucleus, peroxisome, plastid | 37.58 | 36.12 |
| TraesCS7D01G129300.1 | Wheat | endoplasmic reticulum, nucleus, peroxisome | 36.02 | 36.02 |
| TraesCSU01G043600.1 | Wheat | nucleus | 37.27 | 35.82 |
| TraesCS3B01G027400.1 | Wheat | nucleus, peroxisome, plastid | 34.47 | 35.81 |
| TraesCSU01G207000.1 | Wheat | extracellular, plastid | 13.98 | 35.71 |
| TraesCSU01G178600.1 | Wheat | nucleus, plasma membrane, plastid | 33.85 | 35.39 |
| TraesCS3B01G054200.1 | Wheat | nucleus, peroxisome, plastid | 36.34 | 35.24 |
| TraesCS3B01G031000.1 | Wheat | nucleus, plasma membrane, plastid | 35.71 | 35.17 |
| TraesCS7D01G071700.1 | Wheat | cytosol, plasma membrane, plastid | 14.6 | 35.07 |
| TraesCS7B01G030300.1 | Wheat | plastid | 34.78 | 34.78 |
| TraesCS3B01G055200.1 | Wheat | nucleus, plasma membrane, plastid | 31.06 | 34.13 |
| TraesCS4D01G110300.1 | Wheat | cytosol, nucleus, plasma membrane | 29.19 | 34.06 |
| HORVU3Hr1G005450.2 | Barley | endoplasmic reticulum, nucleus, peroxisome | 32.92 | 33.97 |
| TraesCS3B01G030700.1 | Wheat | nucleus, peroxisome, plastid | 33.85 | 33.96 |
| TraesCS3B01G055300.1 | Wheat | cytosol, nucleus, peroxisome | 34.47 | 33.95 |
| TraesCS4B01G109100.1 | Wheat | cytosol, nucleus, plasma membrane | 28.88 | 33.7 |
| HORVU1Hr1G023820.1 | Barley | extracellular | 19.25 | 33.51 |
| HORVU3Hr1G005290.2 | Barley | plastid | 38.82 | 33.42 |
| TraesCS5B01G187100.1 | Wheat | cytosol, nucleus, plastid | 28.57 | 33.33 |
| TraesCSU01G222300.1 | Wheat | cytosol, peroxisome, plastid | 31.68 | 33.33 |
| OQU86433 | Sorghum | cytosol, nucleus, plastid | 36.65 | 33.05 |
| TraesCS3B01G055000.1 | Wheat | nucleus, peroxisome, plastid | 33.54 | 33.03 |
| TraesCS3B01G055100.1 | Wheat | cytosol, nucleus, peroxisome | 33.54 | 33.03 |
| TraesCS3B01G054900.1 | Wheat | nucleus, peroxisome, plastid | 33.23 | 32.72 |
| EES00395 | Sorghum | cytosol, nucleus, plastid | 34.47 | 32.46 |
| TraesCS3B01G054800.1 | Wheat | nucleus, peroxisome, plastid | 32.92 | 32.42 |
| TraesCSU01G206900.1 | Wheat | cytosol | 15.84 | 32.08 |
| TraesCS3B01G031300.1 | Wheat | nucleus, plasma membrane, plastid | 32.92 | 32.02 |
| EES02585 | Sorghum | cytosol, nucleus, plastid | 31.06 | 30.77 |
| KXG32022 | Sorghum | nucleus | 31.37 | 29.97 |
| HORVU4Hr1G069550.1 | Barley | plastid | 17.08 | 28.21 |
| OQU88982 | Sorghum | plastid | 21.43 | 27.38 |
| KXG32016 | Sorghum | cytosol | 26.09 | 26.09 |
| HORVU3Hr1G005470.1 | Barley | plastid | 25.47 | 25.79 |
| OQU86440 | Sorghum | nucleus, plasma membrane, plastid | 25.78 | 24.7 |
| TraesCS3B01G018200.1 | Wheat | plastid | 31.37 | 23.11 |
| HORVU3Hr1G012260.1 | Barley | cytosol, nucleus | 22.36 | 20.0 |
| TraesCS3D01G017900.1 | Wheat | cytosol, nucleus, plasma membrane | 27.02 | 17.09 |
| TraesCS3A01G028000.1 | Wheat | plasma membrane | 30.12 | 14.95 |
| TraesCS3D01G017300.1 | Wheat | plastid | 30.75 | 14.78 |
| TraesCSU01G166800.1 | Wheat | plastid | 31.37 | 14.6 |
| TraesCS3D01G018000.1 | Wheat | nucleus, peroxisome, plasma membrane | 30.43 | 14.43 |
| TraesCS3B01G018100.1 | Wheat | nucleus, peroxisome, plasma membrane | 30.43 | 14.41 |
| TraesCS3A01G028600.1 | Wheat | plastid | 30.12 | 14.02 |
| TraesCS1D01G333100.2 | Wheat | nucleus | 32.61 | 13.01 |
| HORVU3Hr1G005410.9 | Barley | mitochondrion | 29.5 | 12.65 |
| TraesCS1B01G344300.1 | Wheat | nucleus | 32.92 | 12.44 |
| TraesCSU01G166900.1 | Wheat | plasma membrane | 28.57 | 9.67 |
| TraesCS3D01G017400.1 | Wheat | plastid | 30.75 | 9.59 |
| TraesCS3A01G028500.1 | Wheat | plastid | 29.81 | 9.3 |
| HORVU3Hr1G005400.7 | Barley | plasma membrane, plastid | 28.57 | 8.81 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:7-in-absentia-prot_TRAF-dom | EntrezGene:8070426 | UniProt:C5XE64 | EnsemblPlants:EES00397 |
| ProteinID:EES00397 | ProteinID:EES00397.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | GO:GO:0061630 | InterPro:IPR008974 |
| InterPro:IPR013010 | InterPro:IPR013083 | PFAM:PF03145 | PFscan:PS51081 | PANTHER:PTHR10315 | PANTHER:PTHR10315:SF46 |
| InterPro:SINA-like | EnsemblPlantsGene:SORBI_3003G092000 | SUPFAM:SSF49599 | InterPro:TRAF-like | UniParc:UPI0001A84814 | RefSeq:XP_002455277.1 |
| InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_SIAH | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:8012075..8013728
Molecular Weight (calculated)
33501.5 Da
IEP (calculated)
7.150
GRAVY (calculated)
0.065
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGEPSQTPM KTGDRSSAKK ARVESSPRDQ VKLETTTGKE EAAASCGSGL LVLGGDAAAA ARTEVVVRID RDMLHCPLCT LPLKPPIFQC GVGHMVCGSC
101: HGQLSTNQCH WCAGANAFCP AMDAVISKVL VPCPHEAYGC RASLAYYLAS DHGSACAHAP CACGEPGCAF LGSPPMLLSH LAAAPHCWPV DKLQYGEVLR
201: IRVPDTEPRR LLVAEEDGGE RVFVLAVGGD RAARVVPVTA ACVRAPGAAA AGPQFTCKMW ATGCKAPASG KMESVLVDME VPSASAAGAV AADEVDTFLP
301: VPPKMLRGPS SQMHLSVRID KV
101: HGQLSTNQCH WCAGANAFCP AMDAVISKVL VPCPHEAYGC RASLAYYLAS DHGSACAHAP CACGEPGCAF LGSPPMLLSH LAAAPHCWPV DKLQYGEVLR
201: IRVPDTEPRR LLVAEEDGGE RVFVLAVGGD RAARVVPVTA ACVRAPGAAA AGPQFTCKMW ATGCKAPASG KMESVLVDME VPSASAAGAV AADEVDTFLP
301: VPPKMLRGPS SQMHLSVRID KV
001: MARSGGNDGH RAGDSRLSKR QRLPPSPDES EEELDPELFE EPSNLEGYED GEFEEDEEEF EEEEEELEEE EDEEEEEEEN VTTDEQSGSP KSSQPVKLQS
101: SDVLDCPTCC EPLKRPIYQC SNGHLACSSC CQKLNKKCSF CRCNIGDIRC RAMEKVIEAS IVPCPNAKHG CKETTTYCNQ SSHEKVCKFV RCSCPVSNCN
201: YVSSYSNLKS HACSTAHVWG EDDIHFQLVI DRPRIFNMNL GRKKTVVFKE EKEGDLIVVQ AFKGLEGVYV TVNRIAHMAP GIRDLSCSLA KLNEYSTLRS
301: GSLVKKIQKV REKMHLEDDL MWIPPKMLSG DHWKMQICIA YGYKFIHI
101: SDVLDCPTCC EPLKRPIYQC SNGHLACSSC CQKLNKKCSF CRCNIGDIRC RAMEKVIEAS IVPCPNAKHG CKETTTYCNQ SSHEKVCKFV RCSCPVSNCN
201: YVSSYSNLKS HACSTAHVWG EDDIHFQLVI DRPRIFNMNL GRKKTVVFKE EKEGDLIVVQ AFKGLEGVYV TVNRIAHMAP GIRDLSCSLA KLNEYSTLRS
301: GSLVKKIQKV REKMHLEDDL MWIPPKMLSG DHWKMQICIA YGYKFIHI
Arabidopsis Description
E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:F4IEX9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.