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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, nucleus, peroxisome
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G054300.1 Wheat nucleus, peroxisome, plastid 92.79 93.92
TraesCSU01G044900.1 Wheat cytosol, nucleus, peroxisome 91.29 91.57
TraesCS3D01G015700.1 Wheat cytosol, nucleus, peroxisome 86.79 88.92
TraesCS3A01G030000.1 Wheat nucleus, plasma membrane, plastid 87.09 87.61
TraesCS3A01G031400.1 Wheat cytosol, nucleus, peroxisome 85.59 86.89
TraesCS3B01G028400.1 Wheat nucleus, peroxisome, plastid 71.17 70.33
HORVU3Hr1G005290.2 Barley plastid 78.38 69.79
TraesCS3B01G054200.1 Wheat nucleus, peroxisome, plastid 68.47 68.67
TraesCS3B01G030800.1 Wheat nucleus, plasma membrane, plastid 57.06 64.85
TraesCS3B01G030900.1 Wheat cytosol, nucleus, plasma membrane 62.46 64.8
TraesCS3B01G031000.1 Wheat nucleus, plasma membrane, plastid 62.76 63.91
TraesCS3B01G079100.1 Wheat cytosol, endoplasmic reticulum, nucleus 61.86 63.38
TraesCS3B01G079000.1 Wheat cytosol, nucleus, plastid 58.56 62.7
TraesCS3B01G055200.1 Wheat nucleus, plasma membrane, plastid 54.35 61.77
TraesCS3B01G054800.1 Wheat nucleus, peroxisome, plastid 60.06 61.16
TraesCS3B01G055000.1 Wheat nucleus, peroxisome, plastid 60.06 61.16
TraesCS3B01G055300.1 Wheat cytosol, nucleus, peroxisome 60.06 61.16
TraesCS3B01G031300.1 Wheat nucleus, plasma membrane, plastid 60.36 60.73
TraesCS3B01G055100.1 Wheat cytosol, nucleus, peroxisome 59.46 60.55
TraesCS3B01G054900.1 Wheat nucleus, peroxisome, plastid 59.46 60.55
TraesCS3B01G030700.1 Wheat nucleus, peroxisome, plastid 57.06 59.19
TraesCS7B01G030300.1 Wheat plastid 45.65 47.2
TraesCS3B01G027400.1 Wheat nucleus, peroxisome, plastid 40.24 43.23
EES00397 Sorghum plastid 39.04 40.37
TraesCS4B01G109100.1 Wheat cytosol, nucleus, plasma membrane 33.33 40.22
TraesCS5B01G187100.1 Wheat cytosol, nucleus, plastid 32.73 39.49
Os01t0122701-00 Rice plastid 11.71 38.61
TraesCS3B01G053300.1 Wheat plastid 23.42 38.24
TraesCS7B01G147600.1 Wheat plastid 26.13 38.16
TraesCS7B01G351200.1 Wheat cytosol, nucleus, plastid 32.43 35.06
TraesCS3B01G026900.1 Wheat nucleus 33.33 34.69
TraesCS7B01G040200.1 Wheat cytosol 32.43 34.18
TraesCS3B01G027500.1 Wheat cytosol, endoplasmic reticulum, nucleus 31.83 33.76
TraesCS3B01G054000.1 Wheat cytosol 29.43 31.31
TraesCS3B01G028000.1 Wheat mitochondrion 23.12 29.17
TraesCS3B01G027000.1 Wheat cytosol, nucleus, plastid 31.23 29.13
TraesCS3B01G018200.1 Wheat plastid 33.63 25.63
TraesCS3B01G572900.1 Wheat cytosol 27.03 24.86
TraesCS3B01G116800.1 Wheat cytosol 24.62 24.85
TraesCS3B01G573000.1 Wheat cytosol 23.72 24.76
TraesCS7B01G197600.1 Wheat cytosol 18.32 24.02
TraesCS6B01G375600.1 Wheat plastid 23.72 22.77
TraesCS4B01G105700.1 Wheat cytosol, nucleus, peroxisome 30.03 20.37
TraesCS6B01G375700.1 Wheat plastid 21.02 19.77
TraesCS3B01G018100.1 Wheat nucleus, peroxisome, plasma membrane 33.33 16.32
TraesCS3B01G079200.1 Wheat cytosol, plastid 28.83 16.16
TraesCS1B01G344300.1 Wheat nucleus 34.53 13.5
Protein Annotations
Gene3D:3.30.40.10MapMan:35.1GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006511GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0008270GO:GO:0009056GO:GO:0009987GO:GO:0019538InterPro:IPR008974
InterPro:IPR013010InterPro:IPR013083PFscan:PS51081PANTHER:PTHR10315PANTHER:PTHR10315:SF46InterPro:SINA-like
SUPFAM:SSF49599InterPro:TRAF-likeEnsemblPlantsGene:TraesCS3B01G028800EnsemblPlants:TraesCS3B01G028800.1InterPro:Znf_RING/FYVE/PHDInterPro:Znf_SIAH
SEG:seg:::::
Description
No Description!
Coordinates
chr3B:-:12400168..12401270
Molecular Weight (calculated)
33995.6 Da
IEP (calculated)
7.015
GRAVY (calculated)
0.065
Length
333 amino acids
Sequence
(BLAST)
001: MQGAGAAEGR SRGSPSTMDK ADESAKKARL DLPDAHSVKQ ELVAHDAAAG AGAIVAVPEH SPRAELAVKI DMCVLHCPLC ALPFKPPVFQ CKGGHLACGG
101: CAAQQPSGQC GACADGCGFF DPCPALDAVV SSTRVECPNA GCQRYVTYHE ADEHRGACAH APCRCTEHGC AFVGAAPDLA GHLSAAHSVP VRAIRYGKVS
201: RLQVPVSTPR QLLVGDDDGR VFVLTVGALG AAATAVSVVC ARGSAATRPR FTCKMWVNLT TSAAANGGKA DTVLVEMQMR SSTSPGAMVA AGEPTFLAVP
301: PAYLVPGADG GDGAAGMEVP LSVRIDKIAP WSD
Best Arabidopsis Sequence Match ( AT5G37930.1 )
(BLAST)
001: MARFSVCGGD DGEGPSNNNH QSRKRQRLPS IDENEEDAET SDAGSSGEED EDETQNQGMR PESEDRGSTS DDSDREVVIE ERRFGKFVNS QSSSSSKDSP
101: LSVTLLDPDV LDCPICCEPL KIPIFQCDNG HLACTLCCTK VRNRCPSCTL PIGYVRCRAM EKVIEASRVS CLNAKYGCKE STSYGNRFSH EQVCVFTPCS
201: CPILDCHYTG YYKDLNNHVR AEHKDDLISF VWNTRLTISL DLNKKTTILQ EENDGHVIVV QVFRALHAVY VSVSCIAPLT PGVGRLSCRL AKITVDSLLK
301: QGFMVKNIQK VTNEHPEDGF MLIPSYLFSG NDNLNLQIWI GHGRIFVHS
Arabidopsis Description
E3 ubiquitin-protein ligase SINA-like 10 [Source:UniProtKB/Swiss-Prot;Acc:Q84K34]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.